Stenotrophomonas oahuensis: PDM29_05390
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Entry
PDM29_05390 CDS
T10110
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sou Stenotrophomonas oahuensis
Pathway
sou02020
Two-component system
sou02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDM29_05390 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDM29_05390 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sou03000
]
PDM29_05390 (crp)
Transcription factors [BR:
sou03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
PDM29_05390 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Crp
HTH_Crp_2
HVO_A0261_N
SgrR_N
HTH_28
MarR
HTH_11
GntR
HTH_36
Motif
Other DBs
NCBI-ProteinID:
WNH53716
UniProt:
A0ABY9YT25
LinkDB
All DBs
Position
1237403..1238068
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AA seq
221 aa
AA seq
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MSTVRLATSPLALDIATIDRFLAHSHRRRYPARTDVFRPGDPAGTLYYVISGSVSIMAEE
EDDRELVLGYFGAGEFVGEMGLFVESDRREVVLRTRTPCELAEISYERLHQLFLGPLSSD
APRLLYALGQQVSKRLLDTSRKASRLAFLDVTDRIVRTLHDLSKEPEAMSHPQGTQLRVS
RQELARLVGCSREMAGRVLKKLQSDGLLHARGKTVVLYGTR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaactgtgcgccttgctacaagtccattggccctggacatcgccaccattgaccgg
tttctggcccacagccaccgccggcgctaccccgcccggaccgacgtgttccggcccggg
gaccccgccggaaccctctactacgtgatcagcggctcggtttcgataatggccgaggaa
gaagacgaccgcgaactggtgctgggctacttcggcgcgggcgagttcgtcggcgaaatg
ggcctgttcgtcgaatccgaccgccgtgaagtggtgctgcgcacccgtaccccctgcgag
ctggccgagatcagctacgagcgcctgcaccagctgttcctggggccgctctcctccgac
gccccccgtctgctgtatgccctgggccagcaggtctccaagcgcctgctcgataccagc
cgcaaggccagccggctggcgttcctggatgtgaccgaccgcatcgtgcgcaccctgcac
gacctgtccaaggagccggaggccatgagccacccgcagggcacccagctgcgcgtgtca
cgccaggagctggcgcgcttggtgggctgctcgcgtgaaatggccgggcgcgtgctgaag
aagctgcagagcgacgggctgctgcatgcgcgtggcaagacggttgttctgtacggcacc
cggtaa
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