Stenotrophomonas oahuensis: PDM29_05860
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Entry
PDM29_05860 CDS
T10110
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_05860
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_05860
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
WNH53804
UniProt:
A0ABY9YUC4
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All DBs
Position
complement(1337762..1340743)
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AA seq
993 aa
AA seq
DB search
MLNVRHRQRRIPATRLSLALVVALIGTAPAFAQDNAADSGPDERTTELSRVQVTGSNIRR
SDVETSSPVQVIRKQDIENMGARTLLQVLDNLPAARPAQQDSRSLFTGSDGASQANLRGL
GAQGTLVLLNGRRLSYYGAPAGFQTQFVNIDAIPAAAIERMEVLTDGASAVYGTDAVAGV
INVITKRDYQGAEVSITTDTSSRIDSYGEHQASITAGFGDLDADRYNVYASVNLYRRDAI
PLSDYYDKRPSQYYVNNPNYLNNLRLGVGSRPGEFNPGTYFAFDPVTGARRQEAAPGCST
AITEASGTRCVWETWMNREIDSGAETKRNTAYISSHFLIGDSTEAFAEATYTDIDLRANA
GTPNGYNTTTGNPTSWFSRNTGTTVNQFRTPFLGPNNVYNNASPELKALMGGVVGLNYLL
QDVGSGHFGQRNTDQSYRVLAGLRGDIGDWNWETAVATAGTHSVTYQTINVNLDGFERAF
GPYSIEPGTGRVIISDNPAYQFGVINDANAALIREAFPTFDIQSWTRLHTLDGKIEGPLF
QLPAGEMRAAFGFNASRETFYTPGNEDAANGLITQQGGSWFDGKRNTYALFAETVAPITD
KLELDAALRVDKYPNFSANLAPKIGLKYQVLPQLLLRGTYSEGFRAPSLAEAGTGGVFAQ
LGGFEDDIRCDETNAIANLLRQSARSGDVDLGNSLLNSDCSRTVARMTQPNQDLKPEKAK
ISTLGLVYEPASWLSVSADYWFIYRRNEIAAPDYGKPEDIQSMTRNPISDADRANVEAVA
AMCADPASGVVCPGTLPSYSVGNVSSVVGQYKNQGRTLVDGFDIDARSRFSLGDFGSLNI
GVAATIARRKQYYIDDTSRWYYGNTIGYYGNPRLRATLNADWTYRQVTTSFFVNYVGTTK
WAYDQIDAEDNNPETCTASRLKVNPAQCGGVPSWWTANLSVGWRPDEHWTLGVTVKNLFN
RLPFYDPQGFAGDSSDYASIYGRSYSLQLGYRF
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacgtacgccaccgccaacgccgcatccccgccacccgtttatcgcttgcgctc
gtcgtcgccctgatcggaaccgcgccagccttcgcccaggacaacgccgcagacagcggc
ccggacgaacgcaccaccgaactgagccgcgtccaggtcaccggctccaacatccgccgc
tcggatgtggagaccagctcgccggttcaggtgatccgcaagcaggacatcgagaacatg
ggcgcgcgcacgctgctgcaggtgctggacaacctgccggccgcgcggccggcgcagcag
gattcgcgctcgctgttcaccggttccgacggggcctcgcaggccaacctgcgcgggctt
ggcgcgcagggcacgctggtgctgctcaatggccgtcgcctgtcgtattacggcgcgccg
gccggcttccagacccagttcgtcaacatcgacgccattcccgccgccgcgattgagcgc
atggaggtgctgaccgacggtgcgtctgcggtgtacggcaccgatgcggtggccggtgtg
atcaatgtgatcaccaagcgtgactaccagggggcggaagtcagcataaccacggacacc
tcctcacgcatcgattcctatggcgagcaccaggccagcatcaccgccgggttcggcgac
ctggatgcggaccgctacaacgtctatgccagcgtcaacctgtaccgccgcgacgccatt
ccgctcagcgactactacgacaaacggcccagccagtactacgtcaacaacccgaactac
ctcaacaacctgcgcctgggcgtcggcagccggccgggcgagttcaacccgggcacctac
ttcgctttcgacccggtgaccggcgcgcgccgccaggaagccgcaccgggttgcagcact
gccatcaccgaggcgtccggtacgcgttgcgtctgggaaacctggatgaaccgcgagatc
gattccggcgcggaaaccaagcgcaacacggcctacatcagctcgcacttcctgatcggc
gacagcaccgaagcttttgccgaagcgacatataccgacatcgacctgcgcgccaacgcc
ggtaccccgaacggctacaacaccacaaccggcaaccccaccagctggttctcgcgcaac
accggcaccaccgtcaatcagttccgcacacccttcctcggccccaacaacgtgtacaac
aatgccagcccggaattgaaggcgctgatgggtggggtggtgggtctcaattacctgctg
caggacgtcggtagcgggcacttcggccaacgcaacaccgaccagagttaccgcgtgctg
gccggcctgcgcggcgacatcggtgactggaactgggaaaccgccgttgcgaccgccggc
acacattcggtgacctaccagaccatcaacgtcaacctggacggcttcgagcgcgccttc
ggcccgtacagcatcgagccgggtaccggccgggtgatcatctccgacaacccggcctac
cagttcggagtgatcaacgacgcgaatgccgcgctgatccgcgaggccttccccaccttc
gacatccagtcgtggacgcgcctgcacaccctggacggcaagattgaaggtccgctgttc
cagctgcccgctggcgagatgcgcgcggcatttggtttcaacgccagccgcgagacgttc
tacacgcccggcaacgaggacgccgccaacggcctgatcacccaacagggcggctcctgg
tttgacggcaagcgcaacacctatgcgctgttcgccgagacggtggccccgatcaccgac
aagctggagctggacgccgcgctgcgcgtggacaagtatcccaacttcagcgccaatctc
gcgcccaagatcggcctgaagtaccaggtgctgccgcagctgctgctgcgcggtacctac
tcggagggcttccgcgcgccaagcctggccgaggccggcaccggcggcgtgttcgcccag
ctcggcgggttcgaggatgacatccgctgcgacgagaccaatgccatcgccaacctgttg
cggcagtcggcacgcagcggcgatgtcgacctgggcaattcgctgctcaacagtgattgc
agccgcaccgtggcgcgcatgacccagcccaaccaggacctgaagccggagaaggcgaag
atctcgacgctgggcctggtctatgagcccgccagctggttgagcgtgtcggccgattac
tggttcatctatcggcgcaacgagattgccgcgccggactacggcaagcccgaagacatc
cagtcgatgacccgcaacccgatcagcgacgctgaccgcgccaacgtcgaggcggtggcc
gcgatgtgcgccgatccggccagcggcgtggtctgcccgggcacgctgcccagctacagc
gtcggcaatgtgtccagcgtggtgggccagtacaagaaccagggccgcaccctggtcgat
ggtttcgacatcgacgcacgcagccgcttcagcctgggcgacttcggcagcctgaacatc
ggtgtggccgccaccattgcgcggcgcaagcagtactacatcgacgacacctcgcgctgg
tactacggcaacaccatcggctattacggcaacccgcgcctgcgtgcgaccttgaatgcc
gactggacctatcgccaggtcaccaccagcttcttcgtcaactacgtcggcactaccaag
tgggcctatgaccagatcgacgccgaggacaacaatccggagacctgcaccgccagtcgg
ctgaaggtgaacccggcgcagtgcggcggcgtgccgtcgtggtggaccgccaacctgagc
gtgggctggcggccagatgagcactggacccttggcgtcacggtcaagaacctgttcaac
cgcctgccgttctatgacccccagggttttgccggggactccagtgactatgccagcatc
tacgggcgcagctacagtctgcagctcggttatcggttctga
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