Stenotrophomonas oahuensis: PDM29_05880
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Entry
PDM29_05880 CDS
T10110
Name
(GenBank) DeoR family transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sou03000
]
PDM29_05880
Transcription factors [BR:
sou03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
PDM29_05880
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
PF0610-like_N
HTH_PafC
FilR1_N
HTH_Mga
Penicillinase_R
TrkA_N
MarR_2
PaaX
MarR
HTH_5
HVO_A0261_N
Urease_gamma
FaeA
FeoC
EAP30
TrmB
WHD_DprA
Motif
Other DBs
NCBI-ProteinID:
WNH53808
UniProt:
A0ABY9YSW7
LinkDB
All DBs
Position
1344624..1345400
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AA seq
258 aa
AA seq
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MRNTRQRRQQIMQMLVEHGSVQVSELVERFGVSAVTIRTDLTHVEAQGLATRTHGGATLM
RTPPLEQDIHEKDTLNLPLKDSIGAHAAQQVRPGDNIIIDSGSTTMTLARHLRAHRDVTV
MTNGLNIAWELANAPGVELMLTGGLLRKQSLSLQGSQAEASLNTYSFDTLFLGVDGLDLQ
FGLTTHHEAEASLNHRMVERARRVVVLTDASKFGRVSLHRIARLEQVHTIITDASIDAEY
LEGLQRLGIEVIIAETPA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacacacggcagcggcgccagcagatcatgcagatgctggtggagcacggcagc
gtgcaggtcagcgaactggtggagcgcttcggggtgtcggcggtgaccatccgcaccgac
ctcacccacgtggaagcgcagggattggccacgcgtacccacggcggtgccaccctgatg
cgcacgccgccgctggagcaggacatccatgaaaaggacacgctcaacctgccactgaag
gacagcatcggcgcgcacgccgcgcagcaggtgcgccctggcgacaacatcatcatcgac
tccggctccaccaccatgaccctggcgcggcacttacgtgctcaccgcgatgtgacggtg
atgaccaatggtctgaacatcgcctgggaactggccaacgcccccggcgtggaactcatg
ctcaccggtggcctgctgcgcaagcagtcgttgtcgctgcagggcagccaggccgaagcc
agcctcaatacctacagttttgacaccctgttcctgggcgtggatggcctggacctgcag
tttggtctgaccacccatcatgaagccgaagccagcctcaaccaccgcatggtggagcgg
gcacggcgggtggtggtgctgaccgacgcgtccaagtttggacgggtcagcctgcatcgc
attgcccggctggaacaggtccataccatcatcaccgacgccagcattgacgccgagtat
ctggaagggctgcaacggctgggcatcgaagtgatcatcgccgagacccctgcatga
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