Stenotrophomonas oahuensis: PDM29_06370
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Entry
PDM29_06370 CDS
T10110
Name
(GenBank) ankyrin repeat domain-containing protein
KO
K06867
uncharacterized protein
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
PDM29_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
SPC12
LEA_2
Motif
Other DBs
NCBI-ProteinID:
WNH53903
LinkDB
All DBs
Position
complement(1447614..1450949)
Genome browser
AA seq
1111 aa
AA seq
DB search
MTDPRYRRAIAAAFAAGGVLSLGAVFGGVVAAIAATLAQPAFALGISWWRRSRTLPKPAV
LWKQDVPALAALWGVGAVALALLVAWPLGALHDSGSLAAVLGLSVAVSAALLGVWRTWPL
WNEIERSDGSLSRHWRSLAGRDLSAWRGLLVAGLVVALCALIVLPAWPGLVSDGLRWLLV
ALLLVGSPLAHFALQRVTPAETLSAVATPVPARDLFEAAAVQDSQPLEPMAQHETLPALF
EAARSGRVDRALQLLAAGADPRALPDPSWRDQRSLVVLAAVLPDLRLLRELIARGADLNT
PHKGMTPLLAATRDSWHGRPEAVMTLLANGADSRAADAEGNTPLHHAARSSDPGVAALLR
DAAAEVDALNQEGWSPLAVACQVGNWRLARFLLERGARTEPADGTPVLLAAAGTEEDDPA
GVQLLLKHKARADARDRQRRSALHEAALAGHVDIIDVLLTAGANLEARDALSRTPWLEAA
RAGRAGVIEHLLPHKPDLHAVDVEGRNAVLLACMAEGASPLLVRRLLELGIAADVTDPQG
RRAVDIAAAAGRWAIVSLLDRSYPLPAAVSDGLGSAAADAETPDAPLLPDRPPLDLLREA
LGFGNYDGMTALARLCSADELGGLLHEPELALDPQSVEWLLAQGATPDVLDACGDTPMFA
LLSRGTDAVPSLQALLRRGVSPAGAGGLSRLLAACAQHDHASRGLEQLALELLERGADPF
APSPAGDPPLSLAVRLGWLRLQQALLTLGVDREARDSHGMTALHLATALAREGSLKLLVQ
HGASPEARAADGQTPLGVALSIGRRDLADWLDWRVWQLPRRALRDADLPSAAMVGDADAV
RRLIDLGFAVDVVDAQGCTALLRAAGGGHLAVVDLLLARGANPQHAAASGATPLSAAVSM
RQTDIVSALLDAGAELEYRLPGGVTVLMLASALGLPDIAARLLTAGANVHAGDAQQLGPL
HCAALYGFSARDRSRLLALLDTLLLSGAEPDQPAAGSVTPLLLLLGARAEPGTACDEQVV
LAAVERLLDEDVSLEARDPRGFGPLHLAALHGLPLLVQRLLRAGADPDVRDALNRSPREI
AVMRGFIDVAGEFEPRVPGVSSMARFLRDNG
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccgcgctaccgccgtgccattgccgccgcctttgccgcaggtggcgtgctg
tcgctgggcgcggtctttggcggcgttgtcgccgcgattgccgccaccctggcgcagccg
gcgtttgcgctgggcatctcctggtggcgacgcagccgcaccctgcccaagcctgccgtg
ctctggaagcaggacgtgcctgccttggccgccctgtggggcgtcggtgccgtggcactg
gcactgctggtggcctggccgttgggtgccctgcacgacagcggcagcctggcggcggtg
ctcggcctgagcgtggcggtcagcgccgcactgctgggcgtgtggcgcacctggccgttg
tggaacgagatcgagcgcagcgacggcagcctgtcgcggcattggcgcagcctggccggg
cgcgacctcagcgcatggcgtggcctgctggtggccgggctggtggtggcgctgtgcgcc
ctgatcgtgctgccggcatggccgggcctggtttccgatggcctgcgctggctactggtg
gcgctgctgctggtcggctccccgctggcgcacttcgcgctgcagcgggtgactccggct
gaaacgctgtccgcagtggccacgccggtgccggcccgcgacctgttcgaagcggcggcc
gtgcaggacagccagccgctggaaccgatggcccagcacgaaactctgccggcgctgttc
gaggccgcgcgcagcggccgtgttgaccgcgcgctgcaactgctggccgccggggccgac
ccgcgcgcgttgcccgatcccagctggcgcgaccagcgcagcctggtggtgctggccgct
gtgttacccgacctgcgcctgctgcgcgagttgatcgcgcgcggtgccgacctcaatacg
ccgcataagggcatgaccccgctgctggccgccacccgtgacagctggcacggccgcccc
gaagcggtgatgaccctgctcgccaacggggccgattcgcgcgctgccgatgccgaaggc
aacaccccgctgcatcatgccgcgcgcagttccgacccgggcgtggccgcgctgctgcgc
gacgccgccgccgaagtggatgcgctgaaccaggaaggctggtcgccgctggcggtggcc
tgccaggtcggtaactggcgactcgctcgtttcctgctggaacgcggggcgcgcaccgaa
ccggcagacggcaccccggtgctgctggctgccgccggtaccgaagaagacgaccccgcc
ggcgtgcagctgctgctgaagcacaaggcccgcgccgacgcgcgcgaccgccagcgtcgc
agtgcgctgcacgaggccgcactggctggccacgtcgacatcatcgatgtgctgcttacc
gccggcgccaatctggaagcgcgcgacgcgctgtcgcgcaccccgtggctggaagccgcg
cgtgctggccgcgccggtgtgattgagcacctgctgccgcacaaacccgatctgcatgcg
gtcgatgtggaaggccgcaatgcggtgctgctggcctgcatggccgaaggcgcatcgccg
ctgctggtgcgccgcctgctggaactgggcatcgccgccgacgtcaccgacccgcagggt
cgccgcgcggtcgacattgccgcggcggccgggcgctgggcgatcgtctcgctgctcgac
cgcagctatccgttgccggccgcggtgagcgatggcctgggctccgctgcggctgacgcc
gaaacccccgatgcgccgctgctgcccgaccgcccgccgctggacctgctgcgcgaagcg
ctgggctttggcaactacgacggcatgaccgcactggcacggctatgcagtgccgatgaa
ctcggcggactgctgcacgagcccgagctggcgctggatccgcagtcggtggaatggctg
ctggcccaaggggctacgccggatgtgctcgacgcctgcggcgacaccccgatgttcgcc
ctgctgtcgcgtggcaccgacgctgtgccgtcgctgcaggcgctgttgcgccgcggtgtg
tcgcccgcgggagccggtggactgtcacgcctgctggccgcctgcgcgcagcacgaccac
gcctcgcgcgggttggaacagctggccctggaactgctggaacgcggggcggatccgttc
gcgccgtcgccagccggtgacccgccgttgtcgctggcggtgcggctgggctggctgcgc
ctgcagcaggccctgctcacgctgggcgtggatcgcgaggcacgcgacagccacggcatg
accgcgctgcacctggccaccgcactggcccgcgaaggctccttgaagctgctagtgcaa
cacggtgcctcgccggaagcacgtgctgccgatggccagactccgttgggcgtggcgctg
tcgatcggccgccgcgacctcgccgattggctggactggcgcgtgtggcagctgccacgc
cgtgcgctgcgcgacgccgacctgccgtcggcggccatggtcggagatgccgatgccgta
cgccgcctgatcgatctcggtttcgccgtggacgtggtggacgcacaaggctgcaccgcg
cttctgcgcgcggccggcggtggacacctggccgtggtcgacctgctgctggcgcgcgga
gcgaatccgcagcatgccgctgccagtggggccacgccgctgtctgctgcggtcagcatg
cgccagaccgacatcgtttcggcgctgctggatgccggggccgaactggaatatcgcctg
ccgggcggtgtcaccgtgctgatgctcgcctcggcgctggggctgccggacattgccgcg
cgcctgctcaccgccggtgccaacgtgcacgccggcgacgcgcagcagctcggcccgctg
cactgcgccgcgctgtacggcttcagcgcccgcgaccgttcgcgcctgctcgccctgctg
gacacgttgttgctgtctggtgccgagccggaccagccggcggcgggttcggtgacgccg
ttgctgttgctgctcggcgcacgcgccgaacccggtaccgcatgcgacgagcaggtggtg
ttggcggcggtagagcgccttctcgatgaagacgtgtcgctggaggcgcgcgacccgcgc
ggtttcgggccgctgcacctggctgcgctgcacggcctgccgctgctggtgcagcgtctg
ctgcgcgccggggctgacccggacgtgcgcgacgcgctgaaccgcagcccgcgcgagatc
gcggtgatgcgtggcttcatcgacgtcgccggtgagttcgaaccgcgcgtcccgggcgtt
tcgtcgatggcccggttcctgcgcgataacggttga
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