Stenotrophomonas oahuensis: PDM29_06515
Help
Entry
PDM29_06515 CDS
T10110
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou03030
DNA replication
sou03410
Base excision repair
sou03420
Nucleotide excision repair
sou03440
Homologous recombination
Brite
Enzymes [BR:
sou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PDM29_06515 (polA)
DNA replication proteins [BR:
sou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PDM29_06515 (polA)
DNA repair and recombination proteins [BR:
sou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PDM29_06515 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PDM29_06515 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNH53932
LinkDB
All DBs
Position
complement(1478034..1480805)
Genome browser
AA seq
923 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLSNAAGEPTGALFGVVNMLRATLKERPEYVAFVVDAPG
KTFRDDLYADYKANRPPMPDDLRPQVEPMCRIVEALGLTILRVPGVEADDVIGTLALQGQ
QQGLQVTISTGDKDFAQLVRPGIELVNTMTGSRMDSDATVMDKFGVRADQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYQTLDGVMAAAPTMKGKIGENLRAALERLPLNRELVTI
RTNVELDAGPQQLGLREPDVPVLSELYLRYGFTQALKELGGAAPAPAAASDAPVSLRGTA
AGFARSSDDSAPAALDPSLAAPGEYETVLTTEQLQAWVARLDAAELIAFDTETDALDAMQ
ANLVGISVAVEPGKAAYIPVGHNYPGAPSQLPMQQVLDALRPVLENPAKKKLGQHGKYDL
HVLRRHGVNVQGYHDDTMLESFVLNSTATRHDMDSLAMRYLGYNTIKFEDVAGKGAKQIP
FSQVGLDEAARYAAEDADITLRLHRVLGPQLLAVPALDNVYRNIEMPLVPVLARIEANGV
YIDAAELRRQSQDLGARMLAAQQKATELAGHTFSLDSPKQLQAVLFDELKLPALVKTPKG
QPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVNPVTGRVHTSYHQAGAA
TGRLSSSDPNLQNIPIRTDDGRRIRRAFVAPPGHKLLACDYSQIELRIMAHLSEDPGLVR
AFEQGVDVHRATAAEVFSRALDEVTPNERRAAKAINFGLMYGMSAFGLAKNLGIDRGQAQ
DYVALYFRRYPGVRDFMERMRQQARDQGYVETLEGRRLYLNDIHARNQGLRAGAERAAIN
APMQGTAADIIKRAMVKVDDWLAGQGGRARMILQVHDELVFETESEFLETLRSQVVELMS
SAAQLRVPLVVDAGVGDNWDEAH
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgattgacgggtccagttacctgtatcgcgcgttccatgcgctt
ccgccgctgtccaatgctgccggtgagcccaccggcgctctgttcggcgtggtcaacatg
ctgcgtgccaccctgaaggaacgccctgaatacgtggcgttcgtggtcgatgcgcccggc
aagaccttccgcgacgacctgtatgccgactacaaggccaaccgcccgccgatgcccgac
gacctgcgcccgcaggtcgagccgatgtgccgcatcgtcgaggcgctgggcctgaccatc
ctgcgcgtgcccggcgtggaagccgacgatgtcatcggcaccctggccctgcagggccag
cagcagggcctgcaggtgaccatctccaccggtgacaaggacttcgcccagctggtccgt
cccggcatcgagctggtcaacaccatgaccggcagccggatggactcggatgcgacagtg
atggacaagttcggcgtgcgcgccgaccagatcgtcgacctgctggcgctgatgggcgac
accgtggacaacgtgcccggggttgagaagtgcgggcccaagaccgccgccaagtggctg
gccgagtaccagaccctggatggggtgatggctgccgcgccgaccatgaagggcaagatc
ggcgagaacctgcgcgccgcgctggagcgcctgccgctcaatcgcgagctggtcaccatc
cgcaccaacgtggagctggatgccggcccgcagcagctgggcctgcgcgagccggatgtg
ccggtgttgagcgagctgtacctgcgctatggctttacccaggcgctgaaggagctgggc
ggagccgcaccggctccggccgctgccagcgacgccccggtgagcctgcgcggcaccgcc
gccggctttgcccgcagcagcgatgacagcgccccggccgcgttggacccgtcactggcc
gcgccgggcgagtacgagaccgtgctgaccaccgaacagctgcaggcctgggtggcccgg
ctggacgccgccgagctgattgccttcgataccgagactgacgccctggacgcgatgcag
gccaacctggtcggcatcagcgtcgccgtggagccgggcaaggcggcctatattccggtc
ggccacaactaccccggcgcgccgtcccagctgcccatgcagcaggtgctggacgcactc
cgcccggtgctggagaacccggcgaagaagaagctcggccagcacggcaagtacgacctg
catgtgcttcgccggcacggcgtgaacgtgcaggggtaccacgacgacaccatgcttgag
agcttcgtgctcaactccaccgccacccgccacgacatggactcgctggcgatgcgctac
ctcggctacaacacaatcaagttcgaggacgtggccggcaagggagccaagcagattccg
ttctcgcaggtcgggctggacgaagccgcccgctacgccgccgaagacgccgacatcacc
ctgcgtctgcaccgcgtgctgggcccgcagctgctggccgtgccggcgctggacaacgtg
taccgcaacatcgagatgccgctggtgccggtgctggcccggatcgaggccaacggcgtg
tacatcgacgcagccgagctgcgccggcagagccaggacctgggcgcgcgcatgctggct
gcccagcagaaggccaccgagctggccgggcacaccttcagcctggactcgcccaagcag
ctgcaggcggtgctgttcgacgagctgaagctgccggcgctggtgaagacccccaagggc
cagcccagcaccaatgaagaagcgctggaggcgattgccgaccagcacgagctgccgcgg
gtgatcctggagtaccggggcctggccaagctgcgcagcacctacaccgacaagttgccg
gagatggtcaatccggtcaccggccgggtccataccagctaccaccaggccggcgcggcc
accggccggctgtcctcgtccgacccgaacctgcagaacatcccgatccgcaccgacgac
ggccgtcgcatccgccgcgccttcgtggccccgccggggcacaagctgctggcctgcgac
tattcgcagatcgagctgcggatcatggcccacctgtctgaagaccccggcctggtgcgg
gccttcgagcagggcgtggacgtgcaccgggccaccgcggccgaggtgttcagccgcgcg
ctggacgaggtcaccccgaacgagcgccgcgccgccaaggcgatcaacttcggcctgatg
tacggcatgagcgcgttcggcctggccaagaacctcggcatcgaccgcggccaggcccag
gattatgtggcgctgtacttcagacgctatccgggcgtgcgtgacttcatggagcgcatg
cgccagcaggcccgcgaccagggctatgtggaaactctggaagggcgccggctgtatctg
aacgacattcacgcccgcaaccagggcctgcgggccggggccgagcgcgccgcgatcaac
gcgccgatgcagggcactgccgcggacatcatcaagcgggccatggtgaaggtggacgac
tggctggccgggcagggcgggcgtgcgcggatgattctgcaggtgcacgacgaactggta
ttcgaaaccgaaagcgagtttctggaaaccttgcgttcgcaggtggtggaactgatgtcg
tctgcggcgcagttgcgggtgcctctggtggtggatgcgggggtcggcgataactgggac
gaggcgcattga
DBGET
integrated database retrieval system
