Stenotrophomonas oahuensis: PDM29_06795
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Entry
PDM29_06795 CDS
T10110
Name
(GenBank) translocation/assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_06795
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_06795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
DUF748
Motif
Other DBs
NCBI-ProteinID:
WNH53985
LinkDB
All DBs
Position
complement(1553393..1557238)
Genome browser
AA seq
1281 aa
AA seq
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MSTPTPAPQNKIAAPRVRFYRKRRFWAWSGFTALGLGLLFLLLLYWLLQTVAGRDVLLAQ
VMARLPVGATLQWSKVDGPLAGPLVLHDLDFRYDDIHFTAKRAYLDPDLRPLLGRKLQLD
ALQLTDASLNLAKSDEPFEMPSWPESLPQIEMPLAIQVDTITIDGFRITQAGEPLIDIDK
VRGGLEMANGEFRAKQLVVDSDMGDFRVDGRYVPRNDYSTDITVSALMPAPRGRTPARLG
LVARGNLGRMEVALAGYAPEPLQASLIFEGRDDPVWKASAKSKALDLALLVPGMDAGTST
PLSLDFQANGKGGQAHLQGRVQQGDLVVELAPSNVGLADQVLTVSPLVIKGFGGQARLQG
KADFTDRENASLRFSIVANDLTYVPAADPTTPGAAAPVPVTLKEARMGLAGTLKQWAAVG
EASVEREQQSADLQFDIRGSDQAAQIKQLQAKTPGGTLDATGQVAWAPQLDWDVAAKLAA
FDPGYFVPGWDGRLSGSLASKGRQVPPPAGSAPGTAPTYEATVDVPGIKGTLRSRSVDAQ
GRFAIRGTQGEGDVRLAVGNSRLTAKGSVGDRLDVQAQLDPVQLDDLLPGNSGTLRGSVQ
VRGPRTAPDITADLVGNGLRYGDYSAESLSIKGRLPWQGDNGTLALQGTAVQVGMLLDTL
SVNARGSVSNLRLDAQARNELGAVALQGGVRQQGNAWRGDLSQLNIAPIKGDAWNLRGPA
TFTVQGSNFTLSDTCLGAATGGALCASANWPRDGLVVRGDALPLALVQPWLPPQSGRRIH
LRGEITLDGRIRPRGNAWEGNARIASMEGGIRLGDNARGELVRYDQFSASVEMTPAQIVG
KLGVGFQGNGFVDAKFQTGWEASAPLNGELYLNMSRLYWLELFSPDIVRPTGLIEGHVSL
RGTRGQPSLGGEAKLSNFKGEFPALGLTFDQGSGSFVAQPDGSAKITAQANSGKGTLFVD
GGLSWFGDAQPLQLHIHGENVLLSNTPELRIVANPDLNFTLAQTAMELRGTVHVPEADLD
LERLDRGTSVSEDVVVLDPADPEEGPTSPLDMDLTVSLGDKVNMAGFGLKGGLGGKMQVW
ARPGREMTANGALEVRGRYKAYGQDLTITRGNLNWNYNAVSDPRINIRAERRIGDVTAGI
DVTGRAQSPRVDVWSEPAMSQSEALAYLVLGRSLTNASSDQTQQVTAASAALSAGSGLLA
SQLGAKLGLDDAGVSQSRALGGSVIGFGKYISPKLYIGYGVSMVGSGSVLTLKYLLRRGF
DLELESSTVENRGSLNWRREK
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgcccacacccgccccgcagaacaagatcgccgcgccgcgcgtgcgcttctac
cgcaagcggcgcttctgggcatggtcgggcttcaccgcgctgggcctgggcctgctgttc
ctgctgctgctgtactggctgctgcagaccgtggccgggcgcgacgtgctgctggcgcag
gtgatggcacgcctgccggtcggtgccaccctgcagtggagcaaggtcgacggtccgctg
gccggtccgctggtgctgcacgacctggacttccgttacgacgatatccacttcaccgcc
aagcgcgcctacctcgaccccgacctgcgcccgctgctgggccgcaagctgcagctggac
gcgctgcagctcaccgatgccagcctgaacctggccaagagcgacgagccgttcgaaatg
ccgtcgtggccggagtcgctgccgcagattgaaatgccgctggcgatccaggtcgacacc
atcaccatcgacggcttccgcatcacccaggccggcgaaccgctgatcgacatcgacaag
gtgcgcggcgggctggaaatggccaacggcgagttccgcgccaagcagttggtggtggac
agcgacatgggcgatttccgtgtcgatggtcgctatgtgccgcgcaatgactactccacc
gacatcaccgtgagcgcgctgatgccggccccgcgtggccgcacgccggcccggctgggg
ctggtggcgcgtggcaatctggggcggatggaggtggcgctggccggctacgcgccggag
ccgctgcaggccagtctgatcttcgaaggccgcgacgacccggtgtggaaggccagcgcg
aagagcaaggcactggacctcgcgctgctggttccgggcatggatgccggcaccagcacg
ccgctgtcgctggacttccaggccaacggcaaaggcggacaggcgcacctgcagggccgc
gtgcagcagggcgacctggtggtcgaactggccccctccaacgtgggtctggccgaccag
gtgctgaccgtgtcgccgctggtgatcaagggctttggcgggcaggcacggctgcagggc
aaggctgatttcaccgaccgcgagaacgccagcctgcgcttctccatcgtcgccaacgac
ctcacctacgtgccggcggcggacccgaccacgcccggtgcggccgcgccggtgccggtg
acgctgaaagaagcgcgcatgggcctcgccggtaccctgaagcaatgggcggcggtgggc
gaggcctcggtcgagcgcgagcagcagagcgcggacctgcagttcgacatccgcggcagc
gaccaggccgcacagatcaagcagctgcaggccaaaaccccgggcggcacgctggatgcg
accggtcaggtggcctgggcaccgcagctggactgggacgtggccgccaagctggccgct
ttcgatcccggttacttcgtgccgggctgggatgggcgtctgtccggttcgctggcctcc
aagggccggcaggtgccgccgccggccggcagcgcacccggcactgcgccgacctatgaa
gccaccgtggacgtgcccgggatcaaaggcacgctgcgcagccgatcggtggacgcgcag
ggccgcttcgcgatccgcggcacgcagggcgagggcgatgtgcggttggcggtgggcaac
agccgcctgaccgccaagggcagcgtgggcgaccgcctggacgtgcaggcgcagctggac
ccggtgcagctggatgacctgctgcccggcaacagcggcaccctgcgcgggtcggtgcag
gtgcgcgggccgcgtaccgcgccggacatcaccgccgatctggtcggcaatggcctgcgc
tacggcgactacagcgccgaatcgctcagcatcaagggccgcctgccgtggcagggcgac
aacggcacgctggcgctgcagggcacggcggtgcaggtgggcatgctgctggacacgctc
agcgtcaacgcacgcggcagtgtctcgaacctgcggctggatgcgcaggcgcgcaacgaa
ctgggcgcggtggcactgcagggtggcgtgcgtcagcaaggcaacgcgtggcggggcgat
ctttcgcagttgaacatcgcgccgatcaagggcgatgcctggaacctgcgcggcccggcg
acgttcacggtgcagggcagcaacttcacgttgagcgacacctgcctgggtgcggccacc
ggcggcgcgctgtgcgccagcgccaactggccgcgtgacgggctggtggtgcgcggtgac
gcgttgccgctggcgctggtgcagccgtggctgccgccgcagtcgggtcggcgcatccat
ctgcgtggcgaaatcaccttggatggccgcatccgtccgcgcggcaacgcgtgggaaggc
aacgcgcgcattgcctcgatggaaggcggcatccgcctgggcgacaacgcgcgtggcgag
ctggtgcggtatgaccagttctcggccagcgtggagatgaccccggcgcagatcgtcggc
aagctgggcgtgggcttccagggcaacggcttcgtggatgcgaagttccagaccggctgg
gaggccagcgcgccgctgaacggcgagctgtacctcaacatgtcgcggctgtactggctg
gagctgttctcgccggacatcgtgcgaccgaccggtttgattgaaggtcacgtcagcctg
cgcggcacgcgtgggcagccgtcgctgggtggcgaggccaagctgagcaacttcaagggt
gagttcccggcgctggggctgacgttcgatcagggctcgggcagcttcgtggcgcagccg
gatggttcggcgaaaattaccgcgcaggcgaactcgggcaagggcaccttgttcgtggat
ggcggcctgtcgtggttcggcgatgcacagccgttgcaattgcatatccacggcgagaac
gtgctgctgtcgaacacgccggaactgcggatcgtggccaatccggatctgaacttcacc
ttggcccagacggcgatggagctgcgcggcacggtgcatgtgccggaggcagacctggac
ctggagcgcctggatcgcggcacctcggtttcggaagacgtggtggtgctggacccggcg
gacccggaggaagggccgacctcgccgctggacatggacctgaccgtgagcctgggcgac
aaggtcaacatggccggcttcggcctgaagggcgggctgggcggcaagatgcaggtgtgg
gcgcgcccgggccgggagatgacggcgaacggtgcgctggaagtgcgcgggcgctacaag
gcgtacgggcaggatctgacgattacacgcggcaacctcaactggaactacaacgcggtc
agcgacccgcgcatcaacatccgcgcggagcgccggattggcgatgtgacggcgggcatc
gatgtgaccgggcgcgcgcagtcgccgcgcgtggacgtgtggtcggaaccggcgatgtcg
cagtctgaagcgttggcgtacctggtgctgggccgcagcctgaccaatgcgagcagcgac
cagacccagcaggtgacggcggcttcggcggcgctgtcggcgggcagtggcctgctggcc
tcgcagctgggcgcgaagctggggctggacgatgcgggcgtaagccagtcgcgcgcgctg
ggcggttcggtgatcggcttcggcaagtacatctcgcccaagctgtacatcggctacggc
gtctcgatggtcggcagcggctcggtgctcacgctgaagtacctgctacgccgcggcttc
gacctcgaactcgaatcgagcacggtggaaaaccgaggctccctgaactggcggcgcgag
aaataa
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