Stenotrophomonas oahuensis: PDM29_07400
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Entry
PDM29_07400 CDS
T10110
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sou03000
]
PDM29_07400
Transcription factors [BR:
sou03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PDM29_07400
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
Peripla_BP_6
HTH_Tnp_ISL3
MarR_2
HTH_23
HHH_5
HTH_3
HTH_36
HHH
HTH_7
HTH_31
DUF3853
HTH_24
HTH_Crp_2
AmiR_N
HTH_29
HTH_28
HTH_17
Motif
Other DBs
NCBI-ProteinID:
WNH54093
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Position
1705154..1706212
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AA seq
352 aa
AA seq
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MSSRPKTDAAQQDLPKGKAATINDIARLSGVSKKTVSRIINNSPLVRKDTREKVEALMRE
VGYAPDPLARGLAFRRSFLIGMVYDNPTAQYIVDMQYGALDALRGSSFELVVHPCDSRSP
GYIEGVRRFVQQQKLHGVILVPRASEDQALVDMLDEIGCRFTRIASLPLDDTSQMVVTHD
RDGAAEAADYLLSLGHRDIALVTGPSAYRSAHERTAGFIDALAKRGIELPPERIVEAGYT
FESGVAAAEKLLLGKQRPTAIFTGNDEMAAGIYKVALRAGINIPRELSIIGYDDSPLASR
LWPSLTSVRRHTRDTGRTAAAMLIQPDSQAALQIASVRPHLIVRDSCQPPAD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcgccccaagaccgacgccgcacagcaggacctgcccaagggcaaagctgcc
accatcaacgatattgcgcgtctgtccggggtctccaagaaaacggtttcgcggatcatc
aacaactcgccgctggtgcgcaaagacacccgcgagaaggtcgaggcgctgatgcgtgaa
gtgggctatgcgcccgacccgctcgcacgcggtctcgcatttcgccgttcgttcctgatc
ggcatggtctacgacaatcccaccgcgcagtacatcgtggacatgcagtacggcgcgctg
gatgcattgcgcggatccagcttcgaactggtggtgcatccctgcgattcgcgcagcccc
ggctacatcgaaggcgtgcgccgcttcgtgcagcagcagaagctgcacggcgtgatcctg
gtgccgcgtgcctcggaagaccaggcgctggtcgacatgctggatgaaatcggctgtcgc
ttcacccgcattgcctcgctaccgctggacgacacctcgcagatggtggtcacccatgac
cgcgacggtgctgccgaagcggccgactacctgctgtcgctgggccaccgcgatatcgcc
ctggtgaccggcccgagtgcctaccgctcggcgcacgagcgcaccgctggcttcattgat
gcgctggccaagcgcggcatcgaactgccgccggaacgcatcgtcgaggccggttacacc
ttcgaatccggtgtggccgcggcggaaaagctgctgctgggcaagcaacgccccaccgcc
atcttcaccggtaacgatgaaatggccgccggtatctacaaggtggccctgcgcgcgggc
atcaacattccgcgcgagctgtccatcatcggctacgacgacagcccgctggcctctcgc
ctgtggccgtcgctgacctcggtgcgccgccacacccgtgataccgggcgcacggccgcc
gccatgctgatccagcccgacagccaggccgcgctgcagatcgccagcgtccgcccgcac
ctgatcgtgcgcgattcctgccagccgccggcggattga
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