Stenotrophomonas oahuensis: PDM29_07460
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Entry
PDM29_07460 CDS
T10110
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_07460
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_07460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Porin_2
Motif
Other DBs
NCBI-ProteinID:
WNH54105
UniProt:
A0ABY9YU77
LinkDB
All DBs
Position
1717991..1720258
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AA seq
755 aa
AA seq
DB search
MFPNRTAHGRTASVHPLVVALAALLPLTAAAQDAPAAKDPVALDTLQVTAQRRVENAKDV
PVSISAIQGEKLDVLGSAGDDIRFLSARVPSLNIESSYGRAFPRFYIRGLGNTDFDLNAS
QPVSLVYDDVVQESPLLKGFPLFDLAGVEVLRGPQGTLFGRNTPAGVVKFDSARPSQDAD
GYVKVSYGTYDTWNVQGAYGGPLTDRWSARVSALYQRRDNYVDNTRPNAPAEGFEGYDES
AGRVQFLYEGDEFEALFNLHKRKLNGTARLFRANIIQPGSNALVENFDRDKVSNDGVNFS
ELDTWGGSARLQWNLGSVTLHSITGYETAESLNHGDIDGGYGASFLGDGNYGPGFIPFPS
ESADGLPDHRQWTQEFRVESNEWGRFDWQAGVFYFDEDVTIDSFNYDSLTPGNPQTGHAV
QSQRNKAWAVFASGDLDVTDKFKLRAGVRYTQDKKDFTASVLQAVPGGTPVSGPYLAKTD
VDDVSWDLSGVYQITDNLNAYARVAKGFRAPSIQGRLAFGGVSQADSEKVISYEAGIKAD
LFDRRARLGFNVFRYDVDGQQLIAVGGANNTATLLNADKTVGQGVELDFEAYLTDHVLLT
LGSSYNDTEIKDRDLAVAICGGGCTITDPTTVINGGTYALVNGNPLPQAPKLIHNLTLRA
GFPLNDASELYVYTDWAYRSPVNFFLYESPEFRSRSSLEGGLRLGYNWEYGQYDVAVFGR
NLTNQTRVVGAIDFNNLTGFLNEPRTFGVEFTVKF
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgaaccgcactgcccacggccgcaccgcgtccgtgcacccccttgttgttgcc
cttgccgccctgctgccattgacggccgcagcccaggacgcccccgccgccaaggatccg
gtcgccctcgatacgttgcaggtaacggcacagcgccgtgtggagaacgccaaggacgtg
ccggtttcgatctcggccatccagggtgaaaagcttgacgtgctcggctcggccggcgat
gacatccgcttcctgtcggcgcgcgtgcccagcctgaacattgaatcgtcctatggtcgt
gccttcccgcgcttctacatccgcggcctgggcaacaccgacttcgacctcaatgcctcg
cagccggtttcgctggtgtatgacgatgtggtgcaggaaagcccgctgctgaagggcttc
cccctgttcgacctggccggcgtggaagtcctgcgcggcccgcagggcacgctgttcggc
cgcaacaccccggccggcgtggtcaagttcgattcggcccgtccgtcgcaggacgccgat
ggctacgtgaaggtgtcctacggcacctacgacacctggaacgtgcagggcgcgtacggc
ggcccgctgaccgaccgctggtcggcgcgcgtgtcggcgctgtaccagcgccgcgacaac
tacgtcgacaacacccgcccgaacgccccggccgaaggctttgaaggctatgacgagtcc
gccggccgcgtgcagttcctgtacgaaggcgacgagttcgaagcactgttcaacctgcac
aagcgcaagctcaacggcaccgcgcgtctgttccgggccaacatcatccagccgggcagc
aacgcgctggtggaaaacttcgaccgcgacaaggtctccaatgacggcgtgaacttctcc
gagctggacacctggggcggcagcgcgcgcctgcagtggaatctgggcagcgtcaccctg
cactccatcaccggctatgaaaccgccgaatcgctcaaccacggcgacatcgacggcggc
tacggtgccagcttccttggcgacggcaattacggccccggcttcattccgttcccgtcc
gagtcggccgacggtctgcccgaccaccgccagtggacccaggaattccgcgtggaatcc
aacgaatggggtcgtttcgactggcaggccggcgtgttctacttcgatgaagacgtcacc
atcgacagcttcaactacgactcgctcacccccggcaatccgcagaccggccacgccgtg
cagagccagcgcaacaaggcttgggcggtgttcgcgtccggcgacctggacgtgaccgac
aagttcaagctgcgtgccggcgtgcgttacacccaggacaagaaggacttcaccgccagc
gtgctgcaggcggtgccgggtggcaccccggtcagcggcccgtacctggccaagaccgat
gtcgatgatgtcagctgggacctgagcggtgtctaccagatcaccgacaacctcaacgcc
tatgcgcgagtggcaaagggcttccgcgcgccgtcgatccagggccgtctggccttcggt
ggcgtgtcgcaggccgattcggagaaggtgatctcgtacgaagccggcatcaaggccgac
ctgttcgaccgtcgtgcacgcctgggcttcaacgtgttccgctatgacgtcgacggccag
cagctgatcgctgtcggtggtgccaacaacaccgccaccctgctcaacgccgacaagacc
gttggccagggtgtggagctggacttcgaggcctacctgaccgaccacgtgctgctgacc
ctgggcagcagctacaacgacaccgagatcaaggaccgcgacctggcggtggcgatctgc
ggtggcggctgcaccatcaccgacccgaccacggtcatcaatggtggcacctacgcactg
gtcaacggcaacccgctgccgcaggcaccgaagctgatccacaacctgaccctgcgtgcg
ggcttcccgctcaatgacgccagcgagctgtacgtgtacaccgactgggcctaccgcagc
ccggtgaacttcttcctgtatgagtcgccggagttccgcagccgctcgtcgctggaaggt
ggcctgcgcctgggctacaactgggaatacggccagtacgacgtggccgtgtttggtcgc
aacctgaccaaccagacccgcgtggtcggtgcgatcgacttcaacaacctgaccggtttc
ctcaacgagccgcgcacgtttggcgtcgagttcaccgtgaagttctga
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