Stenotrophomonas oahuensis: PDM29_07830
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Entry
PDM29_07830 CDS
T10110
Name
(GenBank) PAS domain-containing protein
Organism
sou Stenotrophomonas oahuensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_4
HATPase_c
PAS_9
PAS
HisKA
DUF7504
PAS_8
DivIC
HPTransfase
GAF_PdtaS
PAS_10
Melittin
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WNH54172
LinkDB
All DBs
Position
complement(1811132..1813501)
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AA seq
789 aa
AA seq
DB search
MAEGAVSRTIRILMVEDSALDAELITAQLERAGVAFTAERTWSHDGMRQALEQHDFDVIL
ADHVLPGFDGDAALTLACELAPQIPFIFVSGTLTEELAVQALKRGARDYVVKSRLQRLPD
AVVRAIAESEERQKLARAEQRLKLITDSLPALISHLDREHRYQFVNQAYQDWYGHAPETV
IGRRAGDVVGQPAFEEVQPYLDRALQGERVNFEISMPQRSGLTRHAQVDLVPEFGADGEV
LGYYAMARDITELKQAQAALKASNAALERQVDERTSALHQSDSRLQALFESSFQHQTLLS
TDGHIIDTNSASLSAILASKPEVRGQLFYESAWFAGTEGAPAIVCEAVLQAASGKASRHE
LELRLPTGKRNFEFSFRPLQDHQGNITAVVSEASETTARRQAEAALRQSQKIEAVGQLTG
GIAHDFNNILTVVAGNVEYAKMLTERLGDVAEGSSRALDNALKGVMRAANVTQRLLAFSR
RQPLKNLPVDLNAQVDGMRDMLQRALGELVQLEVVNSPDIWCVEIDPSQLEASVLNLAVN
ARDAMPHGGRLTIEVDNVHLDDDVATRHPDVRPGQYAMVRVKDSGTGMSADTMARVFEPF
FTTKEVGRGTGLGLSMVYGFAKQSGGHVLLDSVEGVGTSITLLFPRSTATLPTDRPVETS
ALGGYEPQPETTVLVAEDNDDVRAYTVDTLRQLGYRVLEAHDGASALRLLERPDVSVDLL
FSDIVMPGMSGWELAKRVLERKPELKVLFTSGYPRDIDASGAIGRQSTILAKPFTRSDLA
GAIRSALAP
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggtgcagtaagccgcaccatccgcattctgatggtggaggacagcgcactg
gatgcggagctgattaccgcgcagctggagcgtgccggcgttgcattcacggccgagcgc
acgtggtcgcacgatggcatgcgccaggcgctggagcagcacgacttcgacgtgattctg
gccgaccacgtgctgccgggcttcgacggcgacgccgcgctgaccctggcctgtgagctg
gccccgcagattcccttcatcttcgtttccggcacgctgaccgaggaactggcggtgcag
gcgctcaagcgcggcgcgcgcgactacgtggtgaagtcgcgcctgcagcgcctgcccgac
gcggtggtgcgtgcgattgcagaatcggaagaacgccagaagctggcccgcgccgagcag
cgcctgaagctgatcaccgactcgctgccagcactcatttcgcacctggaccgcgagcac
cgctatcagttcgtcaaccaggcctaccaggactggtacggccatgcgccggaaacggtg
attggccggcgtgctggcgacgtggtcggccaaccggccttcgaggaagtgcagccctat
ctggatcgggcgctgcagggcgagcgggtgaactttgagatcagcatgccgcagcgcagc
gggctcacccgccatgcgcaggtagacctggtgccggagttcggcgctgatggcgaagtg
ctgggctactacgccatggcccgcgacatcaccgagctgaaacaggcacaggccgcgctg
aaggccagcaatgcggcgttggagcgccaggtcgacgagcgcacctctgcgctgcaccag
agcgacagccgcctgcaggcgctgtttgagtccagcttccagcaccagacactgttgagc
accgacggccacatcatcgataccaactcggcgtcgctgtcggccattctggcgagcaag
ccggaagtgcgtgggcagctgttctatgaatcggcctggtttgccggcactgaaggcgcg
ccagccattgtctgcgaggcggtgctgcaggccgcatccggcaaggcttcgcggcacgag
ctggagcttcgcctgcccaccggaaagcgcaatttcgagttttcgttccggccgctgcag
gaccatcaaggcaacatcaccgcggtggtgtcggaagcctcggaaaccaccgcacgccgg
caggccgaagccgcgctgcggcagagccagaagatcgaggcggtgggccagttgaccggt
ggcatcgcgcacgacttcaacaacattctgaccgtggttgcgggcaacgtggagtacgcc
aagatgctcaccgagcgtctgggtgatgtcgctgaaggttcttcgcgtgcgttggacaac
gcgttgaagggcgtgatgcgcgcggccaacgtcacccagcgcctgctcgcgttctcacgc
cggcagccgctgaagaacctgccggtggatctgaacgcccaggtcgacggcatgcgtgac
atgctgcagcgcgcgctgggcgaactggttcagctggaagtggtcaacagtccggacatc
tggtgcgtggagatcgatcccagccagttggaagcctcggtgctgaacctcgccgtcaat
gcgcgcgatgcgatgccgcatggcgggcgcttgaccatcgaagtggacaacgtgcatctg
gatgacgatgtcgccacccgtcatccggacgtgcgccccggccagtacgcgatggtgcgg
gtgaaggacagcggcaccggcatgtcggccgacacgatggcgcgggtgttcgagccgttc
ttcaccaccaaggaagtcggtcgcggcaccgggctggggctttcgatggtgtatggcttt
gccaagcagtccggcgggcatgtgctgctggactcggtggaaggcgtgggcacctcgatc
acgctgctgttcccgcgttcgacggcgacgctgccgacggaccgcccggtggaaacttcg
gcactggggggctacgagccgcagccggaaaccaccgtgctggtggccgaagacaacgac
gatgtacgcgcgtacaccgtggatacgctgcggcagctgggctatcgcgtgctggaagcg
catgacggcgcttcggcgctgcgcctgctggaacggccggatgtgagcgtggacctgctg
ttctcggacatcgtgatgccgggcatgtcgggctgggagttggccaagcgcgtgttggaa
cgcaagccggagttgaaggtgctcttcacctccgggtatccgcgcgacattgatgccagc
ggcgcgatcgggcggcagagcacgattttggccaagccattcacgcgcagtgatctggcc
ggtgcgatccggtcggcgttagcgccctga
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