Stenotrophomonas oahuensis: PDM29_09570
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Entry
PDM29_09570 CDS
T10110
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sou03400
]
PDM29_09570
DNA repair and recombination proteins [BR:
sou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PDM29_09570
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
WNH54502
UniProt:
A0ABY9YV28
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Position
complement(2191251..2191700)
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AA seq
149 aa
AA seq
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MVDSLTPEQRSAQMSRIRGANTKLEVLVRKALHSRGFRYRLGGAGLPGRPDIVLPKYRTV
VFVHGCFWHGHSCPLYRLPKTRPDFWADKISRNRERDARVEHELRVSGWRVLTIWECSLR
NASEAMKTAVFDELAASIVDRTPWTNNED
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
ttggttgacagtctcacacccgagcaacggtccgcgcagatgtcgcggatccgtggcgcc
aacacaaagctggaggtcctggtccggaaggctctccattcgcgtggatttcgctatagg
ctgggtggagctggtttgcctgggcgcccggacatcgttcttcccaagtaccgaacggtc
gtatttgttcatggctgcttctggcatgggcatagctgcccgctgtatcgtctgcccaag
acgcgtccggatttctgggctgacaagataagccggaaccgggaacgggatgctcgagtg
gagcatgaactgagggtttcaggatggcgcgtactcactatctgggagtgctcacttcgg
aatgcaagcgaagcgatgaaaaccgcagtttttgacgaactcgcggcgtcaattgtcgac
cgcacaccatggaccaacaatgaagactga
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