Stenotrophomonas oahuensis: PDM29_10360
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Entry
PDM29_10360 CDS
T10110
Name
(GenBank) DEAD/DEAH box helicase
Organism
sou Stenotrophomonas oahuensis
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
WNH50802
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All DBs
Position
complement(2358647..2361955)
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AA seq
1102 aa
AA seq
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MTATYTQEDIRRWFDPRTMEKSANYLFAVRQLRHQNDQITALVQGSARRPYHVWVDLKAS
TRTARSPLVAECSCPVGQGCKHLAAVMAQGLDLVQVSPPVELPAAPLTLLQPPRTELLQA
LSRWHARHSSASRPATPAGPTRGICYDLSAFQHRLAVHVQRTKRAADGTVKREKLLSLGP
DLFLAPAGYLTQDDIAVLSQLWLLHHHHDNRDRIDIVALLQQIIATGRAFIADAIAPVPA
RWAQPRAGTLHWKASEHNGRLRAMPSLQVEGGGRGSVHGRSGCYLDVDTGEVGALQLAMA
AEDAGAFLELPGVFPEETALVSQTLQQIDPALPHPATGDALPVLDAVPVVPVLRLYSVEH
RPMWLPQRAPPEWRDFATATFEYGANSRHLDDPSVFVQDDRGQLSLLARDAAEEHLRERE
LQAAGLYRDPRPLDIQPATGPQFLPRSGDWAQFLQNEMPQLEALGWRVEPDAAFRHRVTE
VDAITLDVQADRDVPGWFEIGLDIEVDGQTLALAPLLQQVLNTDPRWSRGAASVIADDEL
VLLPSTGPRRLGLRAGRLKPLVALLGDLFGPRRSRLRVPLHDHARLRTLHETAGLRLKDD
TMARSVAQRLLDGPEMTPAQPPAGLQATLRPYQLDGLSWLQHLRQHNLGGVLADDMGLGK
TLQTLAHIQLEKEAQRLRQPVLVVVPTSLLHNWQAEAERFTPDLRVLVLHGPSRAENFPQ
IERHDVVLTTYALLWRDEEVLRDQAWHLLVLDEAQQAKNPRSRAAMALRSLKANHRLCLT
GTPMENHLGELWTQFDFLLPGLLGSEKVFNQQWRHPIERNADTQRAQWLARRMRPFLLRR
RKDEVAAELPEKTLITRSVVLEGAQRDMYETVRATMEEKVRHAVAQQGLARSHIVVLDAL
LKLRQVCCDPRLLPGTRAGATASAKLELLREMLPEMVEEGRRILLFSQFTSMLDLLAELL
DELKLGYVMLTGQTRDRQTPVQRFMQGEVPIFLISLKAGGVGLNLTRADTVIHFDPWWNP
AAENQATDRAHRIGQEQPVFVYKLIAAGSIEERIAEMQERKAALADTILDDGGNAGPRFS
DEDLQALLAPLPGGTAGRRKQG
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacctacacccaggaagacatccgccgctggttcgacccgcggacgatggag
aaaagcgccaactatctgttcgcggtgcgccagctgcgccatcagaacgaccagatcacc
gcgctggtgcagggcagcgcacgtcgcccgtaccacgtgtgggtcgacctgaaagccagc
acccgcaccgcccgcagcccgctggtggccgaatgcagctgcccggtgggccagggctgc
aagcacctggcggcggtcatggcacaggggctggacctggtgcaggtgagccctccggtg
gaactgccggccgcgcccctgaccctgctgcagccaccgcgcacggaactgctgcaggcg
ctgtcgcgctggcatgcgcgccacagcagcgcgagccgcccggccacgccggccgggccg
acacgcgggatctgctacgacctgtccgcgttccagcatcgcctcgccgtgcatgtgcag
cgcaccaagcgggccgcggatggcaccgtcaaacgcgagaagctgctcagcctgggaccg
gacctgttcctggctccggctggctacctcacccaagacgacatcgccgtgctgtcacag
ctgtggctgctgcaccaccaccacgacaaccgtgaccggatcgacatcgtggccctgctg
cagcagatcatcgccaccggccgcgccttcattgccgacgccatcgcgccggtcccggcg
cgctgggcacaaccgcgtgcgggcacgctgcactggaaggccagcgagcacaacggccgc
ctgcgtgcgatgccttcgctgcaggtggaaggcggtgggcgcggcagcgtgcacggccgc
tcaggctgctacctggacgtcgacacgggtgaggtgggggcgctgcaactggcgatggcc
gccgaagatgccggtgcctttctcgaactgcccggggtgttccccgaagagaccgcgctg
gtcagccagaccctgcaacagatcgacccggccctgccccacccggccaccggcgatgcg
ctgccggtgctggatgcggtgccggtggtcccggttctgcgcctgtacagcgtggagcac
cgccccatgtggctgccccagcgcgcccctcccgaatggcgcgatttcgccaccgccacc
ttcgagtacggggccaacagccggcatctggatgacccatcggtgttcgtgcaggacgat
cggggccagctgagcctgctggcccgggatgcggccgaggagcacctgcgcgaacgcgaa
ctgcaggcagcaggcctgtaccgcgacccgcgacctttggatatccagcccgccacggga
ccgcagttcctgccacgcagtggcgactgggcccagttcctgcagaacgagatgccacag
ctggaggcgctgggctggcgggtggaacccgatgccgcattccgccaccgggtgaccgag
gtcgacgcgatcaccctggacgtgcaggccgaccgcgacgtgcccggctggttcgagatc
ggcctggacatcgaggtggacggccagaccctggcgctggctccgttgctgcagcaggtg
ttgaacaccgacccgcgctggtcgcgcggcgcggcatcggtgattgccgatgatgagctg
gtgctgctgccctccaccggcccacgccggctgggactgcgcgcgggccggctcaagccg
ctggtggcgctgctgggcgacctgttcggcccgcgccgctcgcgcctgcgcgttccactg
cacgaccatgcccgtctgcgcacgctgcacgagaccgccgggctgcggctcaaggacgac
acgatggcgcgcagcgtggcccagcgcctgctggatggcccggagatgacgcccgcgcag
ccacctgcgggcctgcaggccaccttgcgcccttaccagctggatggcctgagctggctg
cagcacctgcgccaacacaatctgggcggcgtgctggccgacgacatgggcctgggcaaa
accctgcagaccctggcccacatccagctggagaaggaagcgcagcgtctgcgccagccg
gtgctggtggtggtgccgacctcgctgctgcacaactggcaggccgaggccgagcggttc
acccctgatctgcgcgtgctggtgctgcacggcccctcacgcgcggagaacttcccgcag
attgagcgccacgacgtagtgctgaccacgtacgcactgctgtggcgcgatgaggaggta
ctgcgcgaccaggcttggcacctgctggtgctggacgaggcacagcaggccaagaacccg
cgctcgcgcgcggccatggcgctacgttcgttgaaggccaatcaccggctgtgcctgacc
ggcacgcccatggaaaaccatctgggcgagctgtggacccagtttgatttcctgctgccg
ggcctgctgggcagcgaaaaagtgttcaaccagcagtggcgccaccccatcgagcgcaat
gccgatacccagcgcgcgcaatggctggcccggcgcatgcgtccgttcctgctgcgccgg
cgcaaggatgaggtggcggcggagctgccggagaaaacgctgatcacccgcagcgtggtg
ctggaaggcgcgcagcgcgacatgtacgagaccgtgcgcgccaccatggaagagaaggta
cgccacgcagttgcgcagcagggtctggcccgaagccacattgtggtgctggacgccctg
ctgaagctgcgccaggtgtgctgcgacccccgcctgctgcccggcacgcgtgccggtgcc
acggcatcggccaagctggaactgctgcgcgaaatgctgccggaaatggtggaagaaggc
cggcgcattctgctgttctcgcagttcaccagcatgctggacctgttggcggagctgctg
gatgagctcaagctggggtatgtgatgttgacgggacagacccgtgaccggcaaaccccg
gtgcagcgcttcatgcagggcgaggtgccgatcttcctgatcagcctgaaagccggcggc
gttggcctgaatctgacccgggccgacaccgtcatccatttcgacccgtggtggaacccg
gcggcggagaatcaggccaccgaccgcgcgcaccgcattgggcaggagcagccggtgttc
gtctacaagttgattgccgccggcagcatcgaggaacggatcgcggaaatgcaggagcgc
aaggcggcactggccgacaccatcctggatgacggcggcaacgccggcccgcgcttcagc
gacgaggatctgcaggcgttgctggctccgctgcctggggggacggcggggcggcggaag
caggggtag
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