Stenotrophomonas oahuensis: PDM29_10600
Help
Entry
PDM29_10600 CDS
T10110
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
KO
K02453
general secretion pathway protein D
Organism
sou Stenotrophomonas oahuensis
Pathway
sou03070
Bacterial secretion system
Brite
Secretion system [BR:
sou02044
]
Type II secretion system
General secretion pathway protein
PDM29_10600 (gspD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNH50846
LinkDB
All DBs
Position
2417622..2419829
Genome browser
AA seq
735 aa
AA seq
DB search
MTLRLFPLSFAVALLVGCATVPAPEVRRDAVLDGTHQVVAGDGSHDGVETQALGSEGSPQ
AVIRRGTGTMINRSAASAPSPALSQASTGTATFNFEGESVHAVVKAILGDMLGQNYVIAP
GVQGTVTLATPKPVSSAQALNLLEMVLGWNNARMVYSGGRYNIVAADQALAGTVAPSTAP
PANARGFEVRVVPLQYISATEMKKVLEPYARPNAIVNVDSGRNVITLGGTRAELENYLRT
VEIFDVDWLSGMSVGVFPIQTGKAEQVAADLEKVFGEESKTPSAGMFRFLPLENANAVLV
ITPQARYLDQIQQWLERIDTAGGSARLFSYELRYIKAKDLAERLAEAFASENGRGGRSGG
GSLAPGAIAQELNSRDGTSGNSLNNTQLGSSGTSRTGGLGDGTMNLPQRQSGNASFNLEV
QGDSVGVSAVEETNTLLVRSTPQAWRSIREVIEKLDVMPMQVHIEAQVAEVALTGDLSYG
VNWFFEQAVTTGKTESGIDLPSALGRSIWGSISGAVGENGLGWTFLGKNAAAVVTALDKV
TNLRLLQTPSIFVRNNAEATLNVGTQIPINSVSVNTGVGSDNTYSQVQYLDTGVILKVRP
RITRDGVVFLDIVQEVSSAGAVPAGCDPTRSTCNPPINTRKISTEAAVQSGDTIMLAGLI
TNSDEDGANGVPGLSRIPVLGALFGKKTQNSGRSEVIVLLTPTIVRNAQESRNLTDEYSN
RFRAMEPFPTRKATN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgcgcctatttcccctttcgttcgcggtcgccctgctggtcggctgcgccact
gtgcctgccccggaagtgcgccgcgatgccgtgctcgacggcactcaccaggtggtggcc
ggcgatggctcgcatgacggcgtggagacccaggcgctgggcagcgaaggcagcccgcag
gcggtgatccgtcgcggcaccggcaccatgatcaaccgcagtgcggcatcggcaccgtcg
ccggcgctgtcgcaggccagcacggggacggccaccttcaacttcgaaggcgaatccgtg
cacgccgtggtcaaggcgatcctgggcgacatgctgggccagaactacgtcatcgcaccg
ggcgtgcagggcaccgtcaccctggccacgcccaagccggtgtcctccgcccaggcgttg
aacctgctggaaatggtgctgggctggaacaacgcccgcatggtctacagcggcggccgc
tacaacatcgtcgctgccgaccaggccctggccggcaccgtggcacccagtaccgcaccg
ccggccaatgcgcgcggcttcgaggtacgcgtggtgccgctgcagtacatctcggcgacg
gaaatgaaaaaggtgctggagccgtacgcgcggcccaatgccatcgtcaatgtcgacagt
ggtcgcaatgtgatcaccctcggcggcacccgcgcggaactggaaaactatctgcgcacc
gttgagatcttcgacgtggactggctgtcaggcatgtcggtgggcgtgttcccgatccag
accggcaaggctgagcaggtcgccgccgacctggagaaagtgttcggcgaagaaagtaaa
accccaagcgccggcatgttccgcttcctgccgctggagaatgccaatgcggtgctggtg
atcaccccgcaggcgcgctacctggaccagatccagcagtggctggagcgcatcgacacc
gccggtggcagcgcccgcctgttctcctacgagctgcgttacatcaaggccaaggacctg
gcggaacgtctcgccgaagccttcgccagcgagaacggccgcggtggtcgcagtggcggc
ggttcgctggctcccggcgcgatcgcgcaggaactgaacagccgtgacggaaccagtggc
aacagcctcaacaacacccagctgggcagcagcgggaccagccgcaccggcggcctcggc
gatggcaccatgaacctgccgcagcgtcagtccggcaatgccagcttcaacctggaagtg
cagggcgacagcgtcggtgtatccgcggtggaggaaaccaacacgctgctggtgcgttcc
accccgcaggcgtggcgctcgatccgcgaggtgatcgaaaagctcgacgtgatgccgatg
caggtgcatatcgaagcgcaggtcgccgaagtcgcgctgaccggtgacctcagctacggc
gtgaactggttcttcgaacaggcggtgaccaccgggaagaccgaaagcggcatcgacctg
cccagtgcgttggggcgttcgatctggggcagcatctccggtgctgtcggtgagaatggc
ctgggctggacgttcctcggcaagaacgccgctgccgtggtgaccgcgttggacaaggtc
accaacctgcggctgctgcagaccccgtcgatcttcgtgcgcaacaacgccgaggccacc
ttgaacgtgggcacccagattccgatcaactcggtgtcggtgaacaccggcgtgggcagc
gacaacacctacagccaggtgcagtacctggacaccggtgtgatcctcaaagtgcgtccg
cgcatcacccgcgacggcgtggtgttcctggacatcgtgcaggaagtcagctccgccggt
gcggtgccggcgggctgcgacccgacccgcagcacctgcaatccgccgatcaacacccgc
aagatttccaccgaggcggcggtgcagagcggcgacaccatcatgctggccggcctgatc
accaactccgatgaagacggtgccaacggtgtgccggggctgagcaggattccggtgctg
ggcgcgctgttcggcaagaagacccagaacagcgggcgttcggaagtgatcgtgctgctc
accccgaccatcgtgcgtaacgcacaggagtcgcgcaatctgaccgacgagtacagcaac
cgcttccgcgcgatggagccgttcccgacccgcaaggccaccaactaa
DBGET
integrated database retrieval system
