Stenotrophomonas oahuensis: PDM29_12020
Help
Entry
PDM29_12020 CDS
T10110
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou03030
DNA replication
sou03430
Mismatch repair
sou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDM29_12020 (dnaX)
03430 Mismatch repair
PDM29_12020 (dnaX)
03440 Homologous recombination
PDM29_12020 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sou03032
]
PDM29_12020 (dnaX)
03400 DNA repair and recombination proteins [BR:
sou03400
]
PDM29_12020 (dnaX)
Enzymes [BR:
sou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PDM29_12020 (dnaX)
DNA replication proteins [BR:
sou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PDM29_12020 (dnaX)
DNA repair and recombination proteins [BR:
sou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PDM29_12020 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_5
ResIII
AAA_18
AAA_7
AAA_30
PIF1
Mg_chelatase
nSTAND3
TsaE
AAA_assoc_2
AAA_24
AAA_2
Se-cys_synth_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WNH51095
LinkDB
All DBs
Position
2710012..2711937
Genome browser
AA seq
641 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGQCPACLDIDSGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
EQIQGQMTRILAAEEIEADPSAIVQLAKAADGSLRDGLSLLDQAIAYAGGALRDDVVRTM
LGTVDRTQVAAMLDALAEGDGARLLQVVAALAEFSPDWSGVLEALAEGLHRIQVQQLVPG
AAADGEGIDAVGFAQRLRPEVVQLWYQMALSGRRDLFLAPSPRAGFEMAVLRMLAFRPAA
AVPPVPRDAGNDTEVVPGPGNVASGGIAAASVAAPVAAPLAAPAPVVVPDAPAVAEPKAP
EPPVQTAPKPSLPPEPAPTNDPPPWAQGGVEDRDEVLAAEMAGPDAAMVPPWEEPVRPAA
APARPQGIAIAPAPVSAPPVAVAEQAPGEGAALDSADAWLQLVAQSELSGPSRQLAAHAA
FISFQRGVLKLAVSPGFEYLCSDRSLAALTDALSGPLGLAPRIVIEHGEAEAETLHQRSD
RQRGERQQAAETAFLADPNVQVLIQQHGARVVADSIRPIEE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtccttgcccgcaagtggcgtccgaagcgttttgccgagctggtgggc
caggaacacgtggtccgtgcgctcagcaatgcgctggacagcggccgggtgcaccatgcg
ttcctgtttaccggtacccgcggggtcggcaagaccaccatcgcgcgtattttcgccaag
tcgctgaactgcgaacaaggcaccagcgctgacccctgcggccagtgcccggcctgcctg
gacatcgattccggccgctacatcgacctgctggaaatcgacgccgcgtccaataccggt
gtggacgatgtccgtgaggtcatcgaaaacgcccagtacatgccctcgcgcggcaagttc
aaggtctacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaacgcgctgctg
aagacgctggaagagccgcctgaacacgtgaagttcctgctggccaccaccgacccgcag
aagctgccggtgacggtgctgtcgcgctgcctgcagttcaacctgaagcgcctggacgaa
gagcagatccagggccagatgacccgcatcctggcggccgaggagatcgaagccgacccc
agcgccatcgtgcagttggccaaggccgccgacggcagtctgcgtgacggcctgtcgctg
ctggaccaggccattgcgtatgccggcggcgcgctgcgcgacgacgtggtgcgcaccatg
ctgggcacggtcgaccgcacccaggtcgcggccatgctggatgcgctggccgaaggtgac
ggcgcgcgcctgctgcaggtggtggcggcgctggccgagttctcgccggactggagcggg
gtgctggaagcgctggccgaaggcctgcaccgcatccaggtgcagcaactggtgcccggt
gccgccgccgatggcgaaggcatcgatgcagtgggctttgcccagcgcctgcgccccgaa
gtggtgcagctctggtaccagatggccctgagcggccgccgtgacctgttcctggccccg
agcccgcgcgcgggctttgaaatggccgtgctgcgcatgctggccttccgcccggccgct
gcggtgccgcccgttcctcgcgatgccggcaacgacacggaggtggttccgggcccggga
aacgtagctagcggcggcattgccgccgcgtcggtcgctgcccctgtggcagcgccgctt
gctgcgccagcgcctgtagtggtccccgacgcaccggccgtcgccgagccgaaggcaccg
gaaccgccggtgcagaccgcgccgaaaccgtcattaccgcctgaaccggctcccaccaac
gacccaccgccgtgggcgcagggcggggtagaggaccgcgacgaggtcctggccgccgaa
atggcaggtcccgatgcggcgatggtgccgccgtgggaagaacccgtacgtccggccgca
gcgcccgcgcgcccgcaaggcatcgccattgcgccggcaccggtgtctgctccgccagtc
gctgtggctgaacaagcacctggcgaaggcgcggccttggattcagccgatgcctggctg
cagctggtggcgcagagcgagctcagcggcccctcgcggcagctggccgcgcacgcggcc
ttcatcagttttcaacgcggcgtcttgaaactggcggtatcgcccggatttgagtacctg
tgttcagaccgctcgttggcggccctgaccgacgcactgtccggaccgctggggcttgcc
ccgcggatcgtgatcgagcacggcgaggccgaagccgagacgctgcaccagcgttcggac
cgccagcgcggcgaacgtcagcaggcggccgaaaccgccttcttggccgaccccaacgtg
caggtgctcatccaacagcacggcgcgcgggtagtggccgattccatccgtcccattgaa
gagtaa
DBGET
integrated database retrieval system
