Stenotrophomonas oahuensis: PDM29_12230
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Entry
PDM29_12230 CDS
T10110
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_12230
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_12230
BRITE hierarchy
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
WNH51136
UniProt:
A0ABY9YKK3
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All DBs
Position
complement(2748680..2750761)
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AA seq
693 aa
AA seq
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MTALPRRRALLLVVPTLLASALAQAQDARTLDEVNVVADRASTATKTDTPLTQTPQAISV
VSSELFTDRGARNLQETLRYSAGVTADAYGLDTRSDGSTVRGLDPVQYVDGLRRSYGFSP
LARTEVYGLERVEVLRGPSSVLYGAGATGGIINAMTKRPTFTDIGGEVGVQLGNFDRKQF
QADVGGSLNDAGTVAGRVVGLVRDAGMQTDEIDDDRIYIAPSLSWRGESTTFTLLTSYQH
DKTASSQQFLPVVATLNAAPGMPRLDPGTFLGDRDFDKLDSRVYSVTALFDHRFNDTLSL
RSSLRYLDGKTEFRELYPDAYSNPLDPFIDAEKRVVNRNAYGVRPDVRSFTSDNALQFDF
ATGPLQHQLLAGIDYSDYREEALQLDATPTPIDIYAPVSSGIVINGWNRLPNQRTTQLGV
YVQDQIRWVDRVSLVLGARRDHARSETEGLPSQTDNATTWRAGLIGEIGAGVSPYISYSE
SFLPVTGQDIYGRAFKPMEGDQWEGGIKWQPAANMLITASAYRITETNRQTNDPENPLNV
VQTGEIESKGVELEGQFSFERDLTLTAAYSRNRAKVTKSNFEMEVNQRLNDTPQELASLW
LAKGFQIDDVSRLRVGLGGRYVGNSQSLGFGGFIRTPSYTLVDALFEIQVVDWTMALNIT
NLSDKKYYAPCRNFGDCFTGNPRTVTGTISYRF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgactgccctgccgcgtcgccgtgccctgctgttagtggttcccaccctgctggccagc
gccctggcccaggcccaggatgcccggaccctggacgaggtcaacgtggtggccgaccgg
gcgagcaccgcgaccaagaccgacaccccactcacccagaccccgcaggcgatcagcgtg
gtcagcagcgagctgttcaccgaccgcggtgcccgcaacctgcaggaaacgctgcgctac
agcgccggcgtgactgctgatgcgtatggcctggacacccgcagcgacggcagcaccgtg
cgcggcctggacccggtgcagtacgtggacggcctgcgtcgcagctacggcttcagcccg
ctggcccgcaccgaggtgtacgggctggagcgcgtggaggtgctgcggggcccttcgtcg
gtgctgtacggggccggtgccaccggcggcataatcaatgccatgaccaagcgccccacc
ttcaccgacatcggcggtgaggtcggcgtgcagctcggcaacttcgaccgcaagcagttc
caggccgacgtgggcggcagcttgaatgacgccggcaccgtggctggccgcgtggtcggg
ctggtgcgcgatgctggcatgcagaccgatgaaatcgacgatgaccgcatctacatcgcc
ccgtcgctgagctggcgtggtgagagcaccaccttcaccctgctcaccagctaccagcac
gacaagaccgcctccagccagcagttcctgccggtggtggccaccttgaacgcggcaccg
ggcatgccgcgtctggacccgggcacgttcctgggtgacagggacttcgacaagctggat
tcgcgcgtgtacagcgtgaccgcgctgttcgaccaccgcttcaacgatacgctgagcctg
cgctcgtccctgcgttacctggatggcaagaccgagttccgcgaactgtaccccgacgcc
tacagcaacccgctggatccgttcatcgacgctgaaaagcgcgtggtgaaccgcaatgct
tacggcgtgcgtccagacgtgcgttcgttcaccagcgacaacgccctgcagttcgacttc
gccaccggtccgctgcagcaccagctgctggcgggcatcgactacagcgattaccgcgag
gaagcgctgcagctggatgccaccccgacccccatcgacatctacgccccggtatccagc
gggatcgtgatcaacggctggaaccggttgcccaaccagcgcaccacccaactgggcgta
tacgtacaggaccagatccgatgggtcgaccgggtctcgctggtgctgggggcccgccgc
gaccacgcccgcagcgaaacagaagggctgcccagccagaccgacaacgccaccacctgg
cgtgccggcctgatcggtgagatcggtgctggcgtttcgccgtatatcagttacagcgag
tcgttcctgccggtcacgggtcaggacatctacggccgcgccttcaagccgatggaaggc
gaccaatgggaaggcggtatcaagtggcagccggccgcgaacatgctgatcaccgcttcg
gcctaccgcatcaccgagaccaaccgccagaccaatgacccggagaacccgctcaacgtg
gtccagaccggtgagatcgagtccaagggcgtggagctggaaggccagttctcgttcgag
cgcgacctcaccctgacggccgcttattcgcgcaaccgcgccaaggtgaccaagagcaac
ttcgagatggaagtgaaccagcgcctcaacgataccccgcaggaactggcgtcgctgtgg
ctggccaagggcttccagattgacgacgtttcgcgcctgcgcgtcggcctgggtggccgc
tatgtgggcaacagccagtcgctgggcttcggcggtttcatccgcacgcccagctacacg
ctggtggatgcgttgtttgaaatccaggtggtggactggaccatggcgttgaacatcacc
aacctttcagacaagaagtactacgcgccgtgccggaattttggtgattgcttcaccggc
aatccgcgcacggtgaccggtacgatcagttaccggttctga
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