Stenotrophomonas oahuensis: PDM29_12540
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Entry
PDM29_12540 CDS
T10110
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_12540
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_12540
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
MtrB_PioB
YqeY
Motif
Other DBs
NCBI-ProteinID:
WNH51195
LinkDB
All DBs
Position
complement(2804540..2806972)
Genome browser
AA seq
810 aa
AA seq
DB search
MAQRHRRRTSLSRCSLSIALLSALSAPAFAAADVAGDPKTLDQVVVTASGFEQKITDAPA
SISVVSREELSKRPYTSLVDALRDVEGIDVGMETTDKNGRATISMRGMPSEYTLVLIDGR
RQSNVGQLYPNNFGGGQFAYLPPLDAIERIEVVRGPMSTLYGSDAMGGVINIITRRNQDS
WHGSITQGFTVQQDDQFGDARTTDVYLTGPLVKERLDLAVRGSYYDAKASNPEWDALTLP
DGTLWERSIGFGGGGKAVANTNWNTGVRLAFHINDDHDLSLDYDVSRQKYDNSEGQTGTL
DSAASLWRVGNATLPNPNGTGTITRRVVQPRVGYTAYQRYERDQLALSHTGRYGFGTWQT
TLTHTTSNNLGRSLPLTLDERADLQTLWNDVCRRTGAANYCAAGRGNALTALNADEAARL
NAFLPRPLRTMELEGYVLDTMLDMSFGAHKLTVGGQYNDTDMIDGVFGMDGAGYRDNVKQ
QHRMWSVFAEDNWALTDALTATVGVRYDDHNIFGSHVSPRAYLVWNASDAWTFKGGVSTG
YKTPRPDQLFPGVTGFGGQGVLPLVGSPNLQPETSTNYEIASYYEGERWGFNITGFLNKF
DDKIASGGTFPNCEVAPAGSGYCVDVGPGWAALGYSTFSQSVNIDKAETRGVEAAAHVDL
LDSLQLRGNYTYTKSEQTSGVDKGKPVGGSTTPAKHMANASLNWQINDAVSLSLIGEGRY
DRYRDTLVTNVGGVATSQVRYYEDYTIFHLGGSWNINQWLTLNARVNNLFDKDFVSQSCV
LISDSEFNCVDDYATKDQRRSYWISLNAKF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcgccatcgtcgtcgcacgtccctgtcccgctgctcgctgagcatcgccctg
ctcagcgcactgagcgctcctgccttcgctgccgccgatgtcgccggtgatcccaagacc
ctggaccaggtggtcgtcaccgcctcgggcttcgaacagaagatcaccgacgccccggcc
agcatcagcgtggtcagccgcgaagaactgagcaagcgcccgtacaccagcctggtcgac
gccctgcgcgacgtggaaggcatcgacgtcggcatggaaaccaccgacaagaacggccgc
gccaccatctcgatgcgcggcatgccgtccgaatacaccctggtgctgatcgacggtcgc
cgccagagcaacgttggccagctgtacccgaacaacttcggcggcggccagttcgcctac
ctgccgccgctggatgcgattgaacgcatcgaagtggtgcgcggcccgatgtccacgctg
tacggctctgacgccatgggcggggtgatcaacatcatcacccgccgcaaccaggacagc
tggcacggttcgatcacccagggtttcaccgtgcagcaggacgaccagttcggcgacgcg
cgcaccaccgacgtgtacctgaccggcccactggtgaaggagcgcctggacctggccgtg
cgcggcagctactacgacgccaaagcctcgaacccggaatgggacgcgctgaccctgccg
gatggcacgctgtgggaacgcagcatcggcttcggtggcggcggcaaggcggtggccaac
accaactggaacaccggcgtgcgcctggccttccacatcaatgacgaccacgacctgtcg
ctggactacgacgtctcgcgccagaagtacgacaacagcgaaggccagactggcaccctg
gacagcgccgccagcctgtggcgcgtgggcaacgccacccttccgaacccgaacggcacc
ggcaccatcacccgccgcgtggtgcagccgcgcgtgggttacaccgcctaccagcgctac
gagcgcgaccagctggcgctgagccacaccgggcgctatggcttcggcacctggcagacc
acgctgacccacaccaccagtaacaacctgggccggtcgctgccgctgaccctggacgag
cgcgccgacctgcagaccctgtggaacgacgtctgccgccgtaccggcgcagccaactac
tgtgcggcgggtcggggcaacgcgctgaccgcgctcaatgctgacgaagccgcgcgtctg
aacgcgttcctgccgcgcccgctgcgcaccatggaactggaaggctacgtgctcgacacc
atgctggacatgagcttcggcgcgcacaagctgaccgtcggtggccagtacaacgacacc
gacatgattgacggcgtgttcggcatggacggtgccggctaccgtgacaatgtgaagcag
cagcaccgcatgtggtcggtgttcgccgaggacaactgggcgcttaccgacgcgctgact
gccaccgtgggcgtgcgctacgacgaccacaacatcttcggcagccatgtcagcccgcgc
gcctacctggtgtggaatgccagcgacgcgtggaccttcaagggtggcgtcagcaccggc
tacaagaccccgcgtccggatcagctgttccccggcgtgaccggcttcggtggccagggc
gtgctgccgctggtgggttcgccgaacctgcagccggaaaccagcaccaactatgaaatc
gcctcgtactacgagggcgagcgctggggcttcaatatcaccggcttcctcaacaagttc
gacgacaagatcgccagcggcggcaccttcccgaactgcgaagtggccccggccggcagc
ggctactgcgtggacgtcggcccgggctgggcggcgctgggctacagcaccttcagccag
agcgtgaacatcgacaaggctgaaacccgcggcgtggaagcggcggcgcatgtggatctg
ctagacagcctgcagctgcgcggcaactacacgtacacgaagtccgagcagaccagtggc
gtggacaagggcaagccggtcggcggcagcaccaccccggccaagcacatggccaatgcc
agcctgaactggcagatcaatgacgcggtgagcctgtcgctgatcggcgaaggccgctat
gaccggtatcgcgacacgctggtgaccaatgtgggtggggtggccacttcgcaggtgcgt
tactacgaggactacacgatcttccacctgggcggcagctggaacatcaaccagtggctg
accttgaatgcacgggtgaacaacctgttcgacaaggatttcgtctcgcagtcgtgtgtg
ttgatcagcgacagcgagttcaactgcgtggatgattacgcgaccaaggaccagcgtcgt
agttattggatttcgttgaacgcgaagttctga
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