Stenotrophomonas oahuensis: PDM29_12655
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Entry
PDM29_12655 CDS
T10110
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K23169
UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:
6.3.2.53
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00550
Peptidoglycan biosynthesis
sou01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PDM29_12655 (murD)
Enzymes [BR:
sou01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.53 UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase
PDM29_12655 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
WNH51218
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Position
2827659..2829068
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AA seq
469 aa
AA seq
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MRISQLDGKRVALWGWGREGRAAFAVLRARLPSLPLTLFCPEAEAETARAETQGALTVRS
DVSGESLAAFDVVIKSPGISPYGEAAQQAAAQDTQFIGGTSLWFAEHADADGTVRDTVCV
TGTKGKSTTTSLLAHLLRASGARTGLVGNIGLPLLEVLEPQPAPQYWAVELSSYQTGEVA
RSGAHPQVAVVLNLFPEHLDWHGSEARYIADKLSLVTEAAPRIAVLNAADPHLAALQLPH
SEVVWFNQPQGWHMRGEWVYRGEQTVFDTAHTPLPGRHNRGNLCAVLAAIEALGLDAVAL
APAVQSFRPLPNRLQIIGERDGLRFVNDSISTTPHASLAALECFAGQRIALLVGGHDRGL
DWTDFMQHMTHDVPPVEIVTMGANGPRIHALLQPLAEAGRFGLHAAGDLDEAVRIACDAL
GGQGGVVLLSPGAPSYGVYKDYVARGRHFAQLAGFDPNAITAIAGIGIA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatttcgcagcttgacggcaagcgggttgcgttatggggttgggggcgcgagggg
cgggcggcatttgccgtgctgcgcgcgcgcctgccgtcgctgccgctgaccctgttctgc
ccggaggcggaagcggaaacggcgcgcgctgaaacccagggcgcgctgaccgtgcgcagt
gatgtcagcggtgaatcgctggccgccttcgacgtggtgatcaaatcgcccggcatcagc
ccctatggcgaggcggcccagcaggccgccgcgcaggacacgcagttcatcggcggcacg
tcgctgtggtttgccgagcacgctgacgccgacggtaccgtgcgcgacaccgtgtgcgtg
accggtaccaagggcaaaagcaccaccacgtcgctgctggcgcacctgctgcgcgccagc
ggcgcacgcaccgggctggtcggcaacatcggcctgccgctgctggaagtgctggagccg
cagccggctccgcagtactgggcggtggagctgtccagctaccagaccggcgaggtggcg
cgcagtggcgcgcacccgcaggtggcggtggtgctgaacctgttcccggagcatctggac
tggcacggcagcgaggcgcgttacatcgccgacaagctgtccctggtgaccgaagccgcg
ccgcgcatcgccgtgctcaatgccgccgatccgcatctggcggcgctgcaattgccgcac
agcgaagtggtgtggttcaaccagccgcagggctggcacatgcgcggcgagtgggtgtac
cgcggtgagcaaacggtgttcgacaccgcgcatacgccgctgccgggccggcataaccgc
ggcaatctgtgcgcggtgctggcggcgatcgaagcgctgggcctggacgcggtcgcgttg
gctccggcggtgcagagcttccgcccgctgcccaatcggctacagataattggcgagcgt
gatggtctgcgcttcgtcaacgactcgatcagcaccacgccgcacgccagtctggcggcg
ctggagtgtttcgccgggcagcgcatcgcgttgctggtgggcgggcatgatcgcggactg
gactggaccgatttcatgcagcacatgacgcacgacgtgccgccggtggagatcgtgacc
atgggggcgaatggcccgcgtattcatgcgttgctgcagccgctcgccgaggccgggcgg
tttggcctgcatgcggccggcgatctggatgaagccgtgcgaatcgcctgtgatgcgctg
ggcgggcagggtggggtggtgctgttgtcgccgggtgcgcccagctatggggtgtacaag
gattacgtcgcacgcgggcggcattttgcccagctggccggatttgatccgaatgcgatc
accgcgattgccgggattgggatcgcctga
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