Stenotrophomonas oahuensis: PDM29_12830
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Entry
PDM29_12830 CDS
T10110
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sou03000
]
PDM29_12830
Transcription factors [BR:
sou03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PDM29_12830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_23
HTH_38
Sigma70_r4_2
AIRS
HTH_24
HTH_5
HTH_Tnp_ISL3
MarR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
WNH51249
UniProt:
A0ABY9YK40
LinkDB
All DBs
Position
2867752..2868783
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AA seq
343 aa
AA seq
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MATIYDIAKHVGVSAGTVSRALSRPDKVLPATRARIEQAVAALGYVPNTVARNLKTQRSG
KILVTVPDIANPFFAQILQGAEDAAQAVGYAVLLGDTQHLPEREERYAQMLRRNEADGLI
VLGHRLPPTAREIVQQFGDAAPVVNGCEFDPAVGIPSVHIDNAAAAGAVMDHLYGLGHER
IAVVGGPTDNPLHQQRMEGVRTAAKARKRLRSLSIAPGDFSLESGHAATLALLDCETAPT
AIFCFSDQMALGAMAACRELGIRVPDDVSIVGFDDLASSRYLTPPLTTVRQPMREIGARA
VHLLLALIDRVDVPLQQTLEFDLMLRGSTAAPASAGTMLKSPR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccatttacgacatcgcaaagcacgtcggcgtctcggccgggacggtgtcgcgg
gcgctctcgcggccggacaaagtcctgccggccacgcgtgcgcgcatcgagcaggcggtc
gccgcgctgggctatgtacccaatacggtggcccgaaacctcaagacccagcgcagcggc
aagatcctggttacagtgccggatatcgccaacccgttcttcgcgcagatcctgcagggc
gcggaggacgccgcgcaggcggtgggctacgcggtgctgctgggcgacacccagcatctg
cccgagcgcgaggagcgctatgcgcagatgcttcggcgtaacgaggccgatggtctgatc
gtgctggggcatcggttgccgccgacggcgcgcgagatcgtgcagcagttcggggacgcc
gcgccggtggtgaacgggtgcgagttcgacccggccgtgggcattcccagtgtgcatatc
gacaatgccgccgctgcaggcgctgtcatggaccatctgtatgggctggggcacgagcgg
attgccgtggtcggcgggccgaccgacaacccgctgcaccagcaacggatggaaggtgtg
aggactgccgccaaggcgcgcaagcgcctgcgtagtctgagcattgcgccgggggacttt
tcccttgaatcgggccacgcggcgacgcttgcattgctggactgcgaaaccgcaccaacc
gcaatcttctgtttcagcgaccagatggcgctgggggcgatggcggcctgccgggagttg
ggcatccgcgtgccggatgacgtgtcgattgtcggcttcgatgacttggcctcgtcccgt
tacctcacgccgccgttgacgacggtgcgccagccgatgcgggagatcggcgcacgcgcg
gtacacctgctgctggccctcattgatcgggtggacgtgccgctgcagcagacgctggag
tttgacctgatgctacgaggctcgacagcggccccagcatcggcaggaacaatgctgaaa
tccccacgttga
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