Stenotrophomonas oahuensis: PDM29_13855
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Entry
PDM29_13855 CDS
T10110
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sou03029
]
PDM29_13855 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_13855 (bamA)
Mitochondrial biogenesis [BR:
sou03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
PDM29_13855 (bamA)
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_13855 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
YqfD
DUF2255
PUB62-63_C
Motif
Other DBs
NCBI-ProteinID:
WNH51440
LinkDB
All DBs
Position
complement(3112350..3114716)
Genome browser
AA seq
788 aa
AA seq
DB search
MTRLPNRRLLALALAAGFGVPALAQAAEPFTVSDIRVDGLQRITSGTVFTYLPVNRGDTV
TDSKVGESIRALYKTGFFEDVQLQRQGDILVVTVKERPAINKLTVTGNKDIKSDQLLKGL
SDIGLSEGGTFDRLSLDRVTQELRRQYNDRGKYNVEITPTVSPLDRNRVDITIAIKEGKA
AKIQHVNLVGTEKFASEDILETWESKEHNWASWYRRDDQYSKEKLSGDLEKLNSWYLDRG
YVDFSIDSTQVSISPDKRDMFITAGVTEGEQYKISEIKVTGDTILPQEDVERMVIQKPGD
TFSRALLEFSSDTITNSLSNIGYAFAKVNPIPTSNRAEQTVAINMQVVPGPRVGVRRIIF
KGNTRTSDEVLRREMRQFENSWYSQAAIDRSKIRLQRLGYFESVDVETPAVTGSNDQVDV
VYNVKETTSGSFVFGLGYSQSYGMTTSVQLSQNNFLGGGNRVSVEASRSSYLQRYGFSYT
NPYFTDDGVSLGYNLSWRELDYSDFNTAQYNSTNGAAQVVFGVPITENDTVSLMVGIDSN
QITTYPGSTPQSIIDYIDAIGQRTFHSWRTELGWARDTRNDYFMPTRGTYQRVGLETTLP
GSTVEYYKLNYQISKYWPIIPSLVINTRAEVGYGDSYGNDTTRVITNPDGTTRTVTASGL
PFYENFYAGGTNSVRGFEDNTLGPRSEPTLSYSRGQPLGGSLKTVGSVEAYFPRLFDSPS
ARVSAFVDFGNVYTGVDNFKANELRVSTGVALLWRAPVGPISISYAFPLKKEDGDEIERL
QFTFGGQF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgactccccaaccgccgcctgcttgcccttgcacttgccgccggtttcggcgtg
ccggccctggcccaggcagccgagcccttcaccgtcagcgacatccgtgtcgatggtctg
cagcgcatcacctccggtaccgtgttcacctacctgccggtgaaccgtggcgacaccgtg
accgacagcaaggtcggcgaatcgatccgtgccctgtacaagaccggcttcttcgaggac
gtgcagctgcagcgccagggcgacatcctggtagtcacggtcaaggaacgcccggcgatc
aacaagctgaccgtcaccggcaacaaggacatcaagagcgaccagctgctcaagggactg
agcgacatcggcctgagcgaaggcggcaccttcgaccgcctcagcctggaccgcgtgacc
caggaactgcgccgccagtacaacgaccgtggcaagtacaacgtcgagatcaccccgacc
gtgagcccgctggaccgcaaccgcgtggacatcaccattgcgatcaaggaaggcaaggcc
gccaagatccagcacgtgaacctggtcggcacggaaaagttcgcctccgaagacatcctg
gaaacctgggaatccaaggagcacaactgggcgtcgtggtaccgccgtgacgaccagtac
tccaaggaaaagctctccggcgacctggaaaagctgaactcctggtacctggaccgcggc
tacgtggacttcagcatcgactccacccaggtgtcgatcagccccgacaagcgcgacatg
ttcatcaccgccggcgtgaccgagggtgagcagtacaagatttccgagatcaaggtcacc
ggcgacaccattcttccgcaggaagacgtggagcgcatggtcatccagaagccgggcgac
accttctcgcgtgcgctgctggagttcagctcggacaccatcaccaattcgctgtccaac
atcggttacgcgttcgccaaggtgaacccgattccgaccagcaaccgcgccgagcagacc
gtggcgatcaacatgcaggtcgtgccgggtccgcgcgtgggcgtgcgtcgcatcatcttc
aagggcaacacccgcacctccgacgaagtgttgcgtcgtgaaatgcgccagttcgagaac
agctggtactcgcaggccgcgatcgaccgctcgaagatccgtctgcagcgcctgggctac
ttcgaatcggtggacgtggaaacgcctgccgtcaccggcagcaacgaccaggtcgacgtg
gtctacaacgtgaaggaaaccacgtcgggcagcttcgtgttcggcctgggctattcgcag
tcctacggcatgaccacctcggtgcagctgtcgcagaacaacttcctcggcggcggtaac
cgcgtgtcggtggaagcctcgcgcagcagctacctgcagcgttacggcttcagctacacc
aacccgtacttcaccgatgacggcgtgtcgctgggctacaacctgtcgtggcgcgaactg
gattactccgacttcaacaccgcgcagtacaacagcaccaacggtgccgcgcaggtggtg
ttcggcgtgccgatcaccgagaacgacaccgtctcgctgatggtgggcatcgacagcaac
cagatcaccacgtacccgggctccaccccgcagtcgatcatcgactacatcgatgcgatc
ggtcagcgcaccttccattcctggcgcacggagctgggctgggcgcgcgacacccgcaac
gactacttcatgccgacccgcggtacctaccagcgtgttggcctggaaaccacgctgccg
ggttcgacggtcgagtactacaagctcaactaccagatctccaagtactggccgatcatt
ccgtcgctggtcatcaacacccgcgccgaagtgggctacggcgattcctacggcaatgac
accacccgggtaatcaccaatccggacggcaccacccgcaccgttaccgcgtcgggcctg
ccgttctacgagaacttctacgccggcggtaccaactcggtgcgcggtttcgaagacaac
accctgggcccgcgttcggaaccgacgctttcctacagccgcggccagccgctgggtggt
tcgctgaagaccgtgggatcggtcgaagcctacttcccgcgcctgttcgacagcccgtcg
gcgcgcgtctcggccttcgtcgacttcggtaacgtgtacaccggcgtggacaacttcaag
gccaacgaactgcgcgtctccaccggtgtcgccctgctgtggcgcgccccggtcggcccg
atctcgatcagctatgccttcccgttgaagaaggaagatggcgacgagatcgagcgtctc
cagttcacgttcggcgggcagttctaa
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