Stenotrophomonas oahuensis: PDM29_14440
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Entry
PDM29_14440 CDS
T10110
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
sou Stenotrophomonas oahuensis
Pathway
sou02010
ABC transporters
sou03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDM29_14440
03070 Bacterial secretion system
PDM29_14440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_14440
02044 Secretion system [BR:
sou02044
]
PDM29_14440
Transporters [BR:
sou02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PDM29_14440
Secretion system [BR:
sou02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PDM29_14440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
AAA_18
NB-ARC
PRK
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
WNH51546
LinkDB
All DBs
Position
3243047..3245209
Genome browser
AA seq
720 aa
AA seq
DB search
MPQGNAALTVIDGAEVGASEDLRLRGLVLLAQFHGIAADAAQLLHQSGQVAGEVDDAALV
LAARGLGLKAKIVNVPLARLAQLALPALALGEDGEAFIIGRLGDGKALIHDLRERRPRTV
TEAELSERYRGRVLLVASKASVLGELARFDFSWFIPAVIKYRRLLVEVLVVSLFIQLFAL
VTPLFYQVVMDKVLVHRGWTTLEVITIGLVCMAVFEVILSGLRTYVLSHTTSKIDVELGA
RLFRHVLALPLAYFESRRVGDTIARVRELENIRTFLTGQALTSLLDLLFTVVFLAVMFYY
SGWLTLIVVISLPVYALISAGITPVLRRRLNEKFARSADNQSFLVETVTGIGTVKAMAVD
PRVTRTWDNQLAGYVDAGFSVTRIATLGQQSVQLVQKLVAIAILFFGARLVIDGKLTLGQ
LIAFNMLSGQVAAPIIRLAQLWQDFQQVGISVDRLGDILNTRTELPGSRMALPPIKGAVR
FENIVFRYRPDAPEVLAGVDLEIRPGEVIGIVGRSGSGKSTLTKLVQRLYVPERGRVTID
GQDLALADPAWLRRQLGVVLQENFLFNRSIRDNIALGDPGMPLERVIQAAKLAGAHEFIS
ALPEGYDTHVGEQGAGLSGGQRQRVAIARALVGDPRILIFDEATSALDYESEHAVMSNMR
SICAGRTVLIIAHRLSTVRQANRIIVMEQGRIVENGTHAELVERVDGHYARLHRLQQGGP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccacaagggaatgcggccttgaccgtcatagacggtgcagaggtaggtgcgtctgag
gacctgcgcttgaggggactggtgctgctggctcagtttcatggaatcgctgccgatgca
gcgcagctgttacatcagtccggacaggtcgccggcgaagtagacgatgccgcccttgtg
ttggcggcgcgcgggctcggtttgaaggcaaagatcgtgaacgtgccgctggcacgcctg
gcgcagctggcattgcccgcgctggcattgggcgaagatggggaggccttcatcatcggt
cgcctgggcgatggcaaggcgctgatccatgacctgcgtgagcgtcgcccacgcacagtg
accgaggccgagctgagcgagcgttatcgtggccgcgtgctgctggtcgcatccaaggca
tcggtgctcggcgaactggcgcgatttgatttcagctggttcattccggcggtcatcaag
tatcgacgtctgctggtcgaagtgctggtggtgtcgctgttcatccagttgttcgcactg
gtcacgccgctcttctaccaggtggtgatggacaaggtgctggtccatcgcggttggacc
accttggaggtgatcacgatcggcctggtgtgcatggcagtgttcgaggtcatcctcagc
gggctgcgcacctacgtgctttcgcacaccaccagcaagatcgacgtggaactgggcgcg
cgtctgttccggcacgtgctggcgttgccgttggcctacttcgagtcacgccgcgtcggt
gacaccattgcccgcgtgcgcgagctggagaacatccgaacctttctgaccgggcaggcg
ctgacctcgctgctcgatctactgttcaccgtggtgttcctggcagtgatgttctattac
agcggctggctgaccctgatcgtggtcatttccctgccggtgtatgcgctgatttccgcc
ggcatcacgccggtacttcgccgcaggttgaacgagaagttcgcccgtagcgcggacaat
cagtccttcctggttgagaccgtgacgggcatcggcacggtgaaggccatggcggtggat
ccgcgcgtgacccgcacctgggacaaccaactggcgggctacgtggacgcgggtttctcg
gtcacccgcatcgccacgctcggtcaacaaagcgtgcagctggtgcagaagctggtggct
attgcgattctgttcttcggcgcgcgtctggtcatcgatggcaagctcacgctgggtcag
ctgatcgccttcaacatgctgtccggacaggtggccgcgccgatcatccgtctggcgcag
ttgtggcaggatttccagcaggtgggcatctcggttgatcgtctcggggacatcctcaat
acacgcaccgagcttcccggcagccgaatggcacttccccccatcaagggcgcggtgcgc
tttgaaaacattgttttccgctatcgtccggacgcgccagaggtgctggcgggcgtggac
ctggagatccgcccgggtgaagtgatcggtatcgtggggcgttccggctctggcaaaagt
acgttgaccaagctggtgcagcggctctatgtacccgagcgcgggcgcgtgacgattgat
ggccaggatctggccttggcagacccggcctggctgcgccgccagttgggcgtcgtgctg
caggagaacttcctgttcaaccgctcgattcgcgacaacatcgccctgggggacccgggc
atgccgctggagcgtgtcatccaggccgcgaagctggccggggcgcacgagttcatttcc
gcactgccggaaggctatgacacccacgtgggcgagcagggcgcgggcctctccggcggt
cagcgccagcgggtggccattgcccgcgcgctggtcggcgacccgcgcattctaatattc
gacgaagccaccagcgcgcttgactacgagtccgaacacgccgtgatgtccaacatgcgc
agcatctgtgcagggcggaccgtgctgatcattgcccatcgtctatccaccgtgcggcag
gccaaccgcatcatcgtcatggagcagggccgcatcgtggaaaacggcacccatgccgag
ctggttgaacgcgtagatggacattacgcccggctccaccgcctgcagcaggggggacca
tga
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