Stenotrophomonas oahuensis: PDM29_14480
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Entry
PDM29_14480 CDS
T10110
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sou02044
]
PDM29_14480
02035 Bacterial motility proteins [BR:
sou02035
]
PDM29_14480
Secretion system [BR:
sou02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
PDM29_14480
Bacterial motility proteins [BR:
sou02035
]
Pilus system
Pilus assembly proteins
PDM29_14480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
Motif
Other DBs
NCBI-ProteinID:
WNH51553
LinkDB
All DBs
Position
3258622..3262377
Genome browser
AA seq
1251 aa
AA seq
DB search
MASQKKKWLAAASAGVLIAGGWVTYSLLAKQGQGTLWQAPLNIQSGATPAFLMALDDSGS
MLWELLNNTRDGVYSWQSSSSNGRRIGFYNTAGNPYGYGEGTQYHYHTPSYGRDNNNAIP
PLDAFGFVRSPDINTAYFDPRENYPDWKTGSADNPSFKTINPKSAPVDPRPSNSHKFINL
TQDLTTRETRTGTNWNFRVLTGMVIPVDTVIRSETCGASTSNSTTRDQPTGFSRVTRQFT
ANVSGGCQTNFAYFPATFFLKTKMPADYGYLDDKITEVTRPTGGYPGTLYKYEIRLENFN
NDTAKYNAAMQNFANWYSFYRTRREALIGSATNSLHEVDNLRVGWFRINGRSQATMYDLS
DEAQKVQLLSNITANMRADGSTPNRSAANYLGQQFQRAKTSRDPNPPVLLSCQKNAGMLF
TDGYINEEGNKTRMRNLVAPYYDNSLVAGLEANAVPVPKECPDGKLDCKTSLHMNFYGVT
LGTQGDQFGVTYVPNPTRPWELTPNPYEVPPRFGTTTVDLQPGAVDEIWEAVLYSHGEMV
NATRASDITAAMRRIISNVSKGQSPSGTRSLTGARIGKGSLSVEPFYEATNNGTDWYSKL
NAFKLSVDPATRAIVSEQAWEASAKMPSPTARNVWFWRDGAQLQFNATNVSLDNLCSKPT
GLYNNMRLCGGLSSLGDNTKAVSYLLGNASNEVRNGGNLRDRTTVLGDIINSTPLLTSPT
DDYGYRTLGSLGTSYVEYLQSKRDSGRYMVYAGANDGMLHAFDGGMGSDGVQDSSGGTEV
FGYIPSTSIGHMGNLLFPYDSSAEQDSAFDHRYFVDGPVVVGDTYDGSAWGTTLVGTAGA
GGRSVFALDVTDPTTYGSANLLWELNDFDAQLDEVVRNNIGHVLGKPVIVPVKSSGGEVS
FKAIFGNGVESKSGKAALFVVDLVRDRTPTVTTYVVEETGQNLPAGRNGLGNLVVVDRWG
GTGNAQNVRGRDGFADTVYAADQKGAIWKFDLRGTDAPTKPLFTTKTHTDTDGLTYRQPI
TGGMTAASGPSGGVMLFFGTGSFSYLEDRNDESIQGLYAFNDTSDTLPAGTVIPTYTAAN
LRQITVTTTNDVRKVTLGDPPTDSRGWTVILPAGERFIANPTLTSGIVFMPTYLPTRDAE
AQGCNVDGSNWLFGLVANSGDAGLSQVRQGTPDGDSPGAGTAGVPLATGGNAPVKDVTTA
VVPRLGAPDMEEGSDPPAAPGAACMMQVSVAGAPPMYLPYPCGRQSWRQIR
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgcagaagaaaaaatggctcgcggcagcttccgccggcgtgctgatcgccggt
ggctgggtgacctacagcctgctggccaaacagggccagggtacgctgtggcaggctccg
ttgaacatccagagcggtgcgacgcctgcgttcctgatggcactcgatgactccggctcg
atgctgtgggagctgctgaacaatacccgcgacggtgtctacagctggcagtccagcagc
agcaatggccggcggatcggcttctacaacaccgccggtaatccgtatgggtacggcgaa
ggtacgcagtaccactatcacacaccaagctacggtcgtgataacaacaatgccattccg
ccgctggacgccttcggttttgtacgatcgccggacatcaacacggcttatttcgacccc
cgcgagaactatccggactggaagaccgggagcgcggacaatcccagcttcaagacgatc
aatccgaaaagtgcaccggtcgacccacgtccttcaaactcgcacaagttcatcaacctg
acccaggatctgaccacgcgcgagacccgcaccggcaccaattggaacttccgggtgttg
accggcatggtgatcccggtggacacggttattcgctccgagacctgcggcgcgagcact
tccaacagcacgaccagggaccagcccaccgggttcagtcgcgttacccgacagttcacg
gccaacgtttccggtggctgccaaaccaactttgcttactttccggcgacgttcttcctg
aaaacgaagatgcccgccgactacggctacctggatgacaagatcacggaagtcaccagg
cctaccggtggctacccgggcactctgtacaaatacgagatccggctcgaaaacttcaac
aacgacacggccaagtacaacgcggccatgcagaacttcgccaactggtacagcttctat
cgcacgcgacgcgaggcactgatcggttccgcgacgaactcgctgcacgaagttgacaat
ctgcgggtgggctggttccggatcaacggtcgcagccaggcgacgatgtacgatctgagc
gacgaggcgcagaaggtgcagctgctgtccaacatcaccgcgaatatgcgcgctgacggc
tcgacgcccaatcgctcggcggcgaattatctggggcagcagttccagcgcgccaagacc
agccgcgatcccaatcctccagtgctgctgtcgtgccagaagaacgccggcatgctgttc
accgacgggtacatcaatgaggaaggcaacaagacgcggatgcgcaaccttgttgccccg
tactatgacaacagcctcgtcgcggggttggaagccaacgctgtgccggttccgaaggaa
tgcccggacggcaagctcgactgcaagaccagcctgcacatgaatttctacggcgtgacg
ctgggaacgcagggtgatcagttcggtgttacctacgttcccaaccccacccggccgtgg
gagctgaccccgaacccgtacgaggttccgccgcgctttggtacgaccacggttgacctg
cagccgggtgcggtcgatgaaatctgggaggcggtgctgtattcgcacggcgagatggtc
aatgccacgcgtgcgtcggacatcaccgcagcgatgcgccgcatcatcagcaatgtgtcg
aaggggcagtccccctcgggcacgcgctcactcaccggtgcgcgcatcggcaagggctcg
ctgtcggtggagccgttctacgaggcgaccaacaacggtaccgactggtacagcaagctc
aacgccttcaagctgagcgtggaccccgccactcgtgccatcgtctcggaacaggcctgg
gaggcatccgcgaagatgccgtcaccgaccgcgcgcaatgtctggttctggcgcgatggt
gcgcagctgcagttcaatgcgaccaatgtgagcctggacaacctgtgctccaagcccacg
ggtctgtacaacaacatgcggctttgcggcgggctgtccagcctgggagacaataccaag
gcggtgtcctacctgctgggtaatgccagcaatgaggtgcgcaacggtggcaatctgcgc
gatcgcaccacggtgctgggcgacatcatcaactcaacaccgctgctgacctcgccgacc
gatgattacggctatcgcaccctgggttccctgggcacgagctatgtggagtatctgcag
agcaagcgtgatagcggccgctacatggtctatgccggtgccaatgacggcatgctgcat
gccttcgatggcggcatgggctcggatggcgtgcaggacagcagcggcggcacggaagtg
ttcggctacattccgtccacctcgatcggccacatgggcaatctgctgttcccctatgat
tccagtgccgagcaggacagtgccttcgatcatcgttacttcgtcgacggcccggtggtc
gtaggcgacacctacgacggcagcgcctggggcaccaccctggtgggcaccgccggtgcc
ggtggtcgcagcgtattcgcgctcgacgtgacggatccgacgacctacgggtccgcgaac
ctgttgtgggagctcaacgatttcgatgctcagctggacgaggtcgtcaggaacaacatc
ggccatgtgctgggcaagcccgtcattgttccggtgaagtccagcggtggtgaagtctcg
ttcaaggcgatcttcggcaatggcgtcgagagcaaaagcggcaaggcggcgttgttcgtg
gttgatctggtgcgcgaccgcacgccaacggtcaccacttacgtcgtcgaggagaccgga
cagaacctgccggctggccgcaatgggctgggcaatctcgtagtcgtagaccgctggggt
ggcaccggcaacgcgcagaacgtgcgcggacgtgacggcttcgccgatacggtctatgcg
gctgaccagaagggcgcgatctggaagttcgatctgcgtggcacggatgctccgaccaag
ccgttgttcaccaccaagacccacaccgacacggatggcctcacctaccgtcagccgatc
actggcggcatgaccgccgcctcggggccatcgggtggcgtgatgctgttcttcggcacc
ggcagcttcagctatctggaagaccgcaatgatgagagcatccagggtctgtatgccttc
aatgacaccagcgacacgctgcccgcggggacggtgatcccgacctacacggcggccaac
ctgcggcagatcacggtgaccaccaccaatgatgtgcggaaagtcaccctgggcgatccg
cccacggacagccgaggctggacggtcattctgccggcaggcgagcgattcatcgccaac
ccgacgctgacgtctggcatcgtgttcatgccgacttatctgccgacccgggatgcggaa
gcgcaggggtgcaacgtggatggctccaactggctgttcggtctggtcgccaacagcggc
gatgcaggtctgtcccaggtcaggcagggcacgcccgatggcgactcgccgggtgccggc
accgccggcgtccccttggccactggcggtaacgcgccggtcaaggatgtgaccaccgcc
gtcgtgccgcgcctcggtgcgccggacatggaagaaggctcggatccgccggccgccccg
ggtgccgcctgcatgatgcaggtcagtgtggccggtgcaccgccgatgtatctgccgtac
ccctgtggtcgccagtcctggagacagatccggtga
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