Stenotrophomonas oahuensis: PDM29_14525
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Entry
PDM29_14525 CDS
T10110
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PDM29_14525 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_14525 (msbA)
Enzymes [BR:
sou01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PDM29_14525 (msbA)
Transporters [BR:
sou02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PDM29_14525 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_30
AAA_22
nSTAND1
DUF3584
ABC_ATPase
ATP-synt_B
AAA_21
AAA_29
nSTAND3
AAA_23
MreB-like_C
Motif
Other DBs
NCBI-ProteinID:
WNH51559
LinkDB
All DBs
Position
3269574..3271325
Genome browser
AA seq
583 aa
AA seq
DB search
MSNKQHAPIWPIYKRLLGYTKAYWVFMVAAVIAMVVEALAGYHFTKLMDPLVNRGFVNPE
PRMAVILPLTILGLFLMRSLATLVSDYTLARTGRSVVRDLREQVLEKYLHLPSSHFDTEA
TPVMVSRLNYDTEQVTQASADALKTLVADTLTIIAMLVVMLQMSVKVTVAMLVVVPLIGV
IVSIVGKRYRRISRGIQDGMGNMAQTAEQSLAAQQEVKVHGTQAHEISRYARLANRMLGL
NMKVETTRAFASSTVQFLAALALAVIVWVSTREALAGRLNAGQFMGLMTSMMAIIPSLRR
LTSVQTSISRGVAAAERLFGILDMPVERDEGTKKIGRARGELAFEHVMLRYREDTGVALD
DISFVAKPGTVTAIVGRSGSGKTSLIRLVPRFYEPSGGRITLDGVALDDYPLADLRRQVA
MVGQKVMLFDDTVGANIAYGMDATDEQIRAAAEAANAWEFIERMPQQLQTPVGENGALLS
GGQRQRLAIARAILRDAPVLILDEATAALDNESERLVQDALQRLMPERTTLVIAHRLSTI
EHADQVLVMDHGRIVERGTHAELLTMGGLYEHLHSMQFRERQS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaacaacacgcgccgatctggccgatctacaaacgcctgctcggctacacc
aaggcctactgggtgttcatggtggcggccgtcattgccatggtggtggaagcgctggcc
ggctatcacttcaccaagctgatggacccgcttgtcaaccgtggcttcgtcaaccccgag
ccgcgcatggcggtgatcctgccgctgaccattctgggcctgttcctgatgcgcagcctg
gccaccctggtcagtgactacaccctggcccgcaccggccgcagcgtggtccgcgacctg
cgcgagcaggtgctggagaagtatctgcacctgccgtcgtcgcacttcgacaccgaagcc
acgccggtcatggtcagccgcctgaactacgacaccgagcaggtcacccaggccagcgcc
gacgcgctcaagaccctggtggccgacaccctgaccatcatcgccatgctggtggtgatg
ctgcagatgagcgtcaaggtgaccgtggcgatgctggtggtggtgccgctgatcggcgtc
atcgtctccatcgtgggcaagcgttaccgtcgcatcagccgtggcatccaggacggcatg
ggcaacatggcgcagaccgccgagcagtcgctggccgcgcagcaggaagtgaaggtgcac
ggcacccaggcgcatgaaatctcgcgctacgcccgcctcgccaaccgcatgctcggcctg
aacatgaaggtggaaaccacccgcgcgttcgcctccagcacggtgcagttcctggccgcg
ctggcgctggcggttatcgtctgggtgtccacccgcgaagccctggccggccgcctcaac
gccggtcagttcatgggtctgatgacctcgatgatggccatcattccgtcgctgcgccgc
ctgaccagcgtgcagacctcgatctcgcgcggcgtggccgccgccgagcgtctgttcggc
attctggacatgccggtcgaacgcgatgaaggcacgaagaagatcggtcgcgcgcgcggt
gagctggcgtttgaacacgtcatgctgcgctatcgcgaagacaccggcgtggcgctggat
gacatcagcttcgtggccaagccgggtaccgtcaccgccatcgtcggtcgttcgggcagc
ggcaagaccagcctgatacggctggtaccgcgcttctatgagcccagcggcggccgcatc
accctggatggcgtggcgctggatgactatccgctggccgacctgcgccggcaggtggcg
atggtcggccagaaggtcatgctgtttgacgacaccgtgggcgcgaacattgcctacggc
atggacgccaccgacgaacagatccgcgccgccgctgaagccgcgaacgcctgggaattc
atcgagcgcatgccgcagcagctgcagaccccggtcggtgagaacggtgcgctgctgtcc
ggcggccagcgtcagcgcctggcaatcgcgcgggcgatcctgcgcgacgcgccggtgctg
atcctcgacgaagccaccgcggccctggacaacgaatccgaacggctggtgcaggacgcg
ctgcagcgtctgatgcccgagcgcaccacgctggtgatcgcgcaccgtctgtccaccatc
gagcatgccgaccaggtgctggtgatggatcacggccgcatcgtcgagcgcggcacccac
gccgaactgctgaccatgggcggcctgtacgaacacctgcacagcatgcagtttcgcgaa
aggcagtcctga
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integrated database retrieval system
