Stenotrophomonas oahuensis: PDM29_15200
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Entry
PDM29_15200 CDS
T10110
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sou03400
]
PDM29_15200
Enzymes [BR:
sou01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PDM29_15200
DNA repair and recombination proteins [BR:
sou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PDM29_15200
Prokaryotic type
PDM29_15200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WNH51679
UniProt:
A0ABY9YLC3
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All DBs
Position
3393600..3395015
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AA seq
471 aa
AA seq
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MSSALVWFRRDLRLQDNPALHAALEAGHTPVPVYIHAPHEEGSWAPGEASNTWLHRSLAA
LDADLQARGSSLVLRQGDSQAELQALIDETGAEAVYWNRKYEPATQPRDATIKRELREQG
IDAQSCNGSLMFEPWDLATQQGGPYKVFTPYWRNALTRLHIPAPLKLPDTLPAHDARSVS
LAELKLTPTLNWDQQFWEHWQPGEAGAQEALTVFIDGALNGYRQQRDLPDRVGTSLLSPH
LHFGEISPWQIVRRLEAERSAGRDADIDGYIRELGWREFSYHLLHHFPKTPEHNLNPRFD
SFQWARDNPSQLAAWQQGRTGIPIVDAGLRELWATGYMHNRVRMLVASFLCKHMRQHWLH
GARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRIFNPVTQAQKFDPNARYITRWVPE
LATLPVKARFAPWQTPDLLAQHAPSYPALPIVDLAAGRDAALTAYRRTGGE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtcagccctggtctggttccgtcgtgatctgcgcctgcaggacaatcccgctttg
cacgccgcccttgaggccgggcatacgcccgttccggtctacatccatgccccgcatgaa
gagggcagctgggcaccgggcgaagcctccaacacctggctgcatcgctcgttggccgcg
ctcgatgccgacctgcaggcccgcggctcgtcgctggtcctgcgccagggcgacagccag
gccgaactgcaggctctcatcgacgaaaccggcgcggaagcggtgtactggaaccgcaag
tacgaaccggctacccagccgcgcgatgccaccatcaagcgtgagctgcgcgagcagggc
atcgacgcgcaaagctgcaacggcagcctgatgttcgaaccgtgggacctggccacccag
cagggcgggccgtacaaggtattcaccccgtactggcgcaatgcgctgacccggctgcat
atccccgcgccgctgaagctgccggacacacttcccgcccacgacgcccgcagcgtgtcg
ctggcagagctgaagctgactcccacactcaactgggaccagcagttctgggaacactgg
caacccggcgaggctggcgcgcaggaagcgctcaccgtgttcatcgacggtgccctcaac
ggctaccgccagcaacgcgacctgcccgaccgcgtcggcacctcgctgctgtccccgcat
ctgcatttcggcgaaatctcgccttggcagatcgtgcgccggctcgaggctgagcgcagt
gccggccgcgatgccgacatcgatggctacatccgcgaactgggctggcgtgagttctcc
taccacctgctgcatcacttcccgaaaaccccggagcacaacctcaacccgcgcttcgac
agcttccagtgggctcgggacaatccctcccagctggcggcctggcagcagggccgcacc
ggcattcccatcgtcgacgccggcctgcgcgaactgtgggctaccggctacatgcataac
cgcgtgcgcatgctggtcgccagcttcctgtgcaagcacatgcgccagcactggctgcac
ggcgcacgctggttctgggacaccctggtcgacgccgacctggccaacaacaccatgggc
tggcagtgggtcgccggcaccggggccgacgccgcgccgtatttccgcatcttcaacccg
gtgacccaggcgcagaagttcgatcccaacgcccgttacatcacccgttgggtgccggag
ctggcgacgctgccggtgaaggcacgcttcgcgccctggcagaccccggacctgctggcc
cagcacgcgccctcctatccggcactgcccatcgtcgacctggcggccggccgggacgct
gcgctgacggcctaccggcgtacaggcggcgagtaa
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