Stenotrophomonas oahuensis: PDM29_15225
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Entry
PDM29_15225 CDS
T10110
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K19586
membrane fusion protein, multidrug efflux system
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_15225
Transporters [BR:
sou02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PDM29_15225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
YknX_C
HH_MFP_RND
Beta-barrel_RND
RND-MFP_C
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
HH_AAEA_pHBA
CzcB_C
HH_EMRA
Biotin_lipoyl
BSH_YknX
HH_CzcB
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
WNH51684
UniProt:
A0ABY9YLC7
LinkDB
All DBs
Position
3398257..3399456
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AA seq
399 aa
AA seq
DB search
MNLSSSTPIVRRVALGTVTALALAVMVGCSGSHAETAAPPPPQVTAAPVLIKPVSQWDDF
SGRVEAVQSVELRPRVSGYIDKVNYTEGEEVKKGDVLFTIDARSYQAEYDRARAELTRAR
TQASLARSESDRAKKLSDQQAISTETWEQRRAAADQSGAAVQAAQAALDAAALNLEFTKV
RAPINGRAGRAMVTAGNLVTAGDSASVLTTLVSLDTVHVYFDADEGTFLRYSQMARKGER
PSERDSELPVKVGLSGEEGYPHTGKVDFLDNQVTRSTGTIRVRALLDNADRAFTPGLFAR
VQLLGSGQFEAMLIDEKAVLTDQDRKYVYVVDDKNTAQRRDIVLGRGAEGLRIVQQGLKA
GDRVIIDGVQKVFMPGMPVQAKAVAMQAEAKPAAAVALK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttcttcctctactccgattgtccggcgcgttgcgctgggtaccgtgaccgcc
ctggccctggcggtgatggtcggctgcagcggcagccacgctgaaaccgccgcaccgccg
ccgccgcaggtcaccgctgcgccggtgctgatcaagccggtcagccagtgggacgacttc
agtggccgcgttgaagccgtgcagagcgtcgagctgcgtccgcgcgtcagcggctacatc
gacaaggtcaactacaccgaaggcgaagaggtgaagaagggggacgtgctgttcaccatc
gacgcccgcagctaccaggccgagtatgaccgtgcccgtgccgagctgacccgtgcccgc
acccaggccagcctggcccgcagcgaatcggaccgcgccaagaagctgtccgaccagcag
gccatctccaccgaaacctgggaacagcgccgcgccgccgccgaccagtccggtgccgcc
gtgcaggctgcacaagctgcactcgacgccgccgcgctgaacctggagttcaccaaggtg
cgcgcgccaatcaacggtcgtgctggtcgtgcgatggtgacggccggcaacctggtgacc
gccggcgacagcgccagcgtgctgaccacgctggtctcgctggacaccgtgcacgtgtac
ttcgacgccgacgaaggcaccttcctgcgctattcccagatggcccgcaagggcgagcgc
ccgagcgagcgtgacagcgaactgccggtgaaggtcggcctgtccggtgaagaaggctac
ccgcacaccggcaaggtcgacttcctcgacaaccaggtcacccgcagcaccggcacgatc
cgcgtgcgtgcgctgctggacaatgccgaccgcgccttcactccgggcctgttcgcccgc
gtgcagttgctcggtagtggccagttcgaggccatgctgatcgacgagaaggccgtgctc
accgaccaggaccgcaagtacgtgtacgtggtggacgacaagaacaccgcgcagcgtcgt
gacatcgtgctcggtcgcggtgccgaaggtctgcgcatcgtgcagcagggtctgaaggcc
ggcgaccgcgtgatcatcgacggcgtgcagaaggtgttcatgccgggcatgccggtgcag
gccaaggccgtggcgatgcaggccgaagccaagccggcagctgcggttgctttgaaataa
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