Stenotrophomonas oahuensis: PDM29_15640
Help
Entry
PDM29_15640 CDS
T10110
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sou03009
]
PDM29_15640 (der)
Ribosome biogenesis [BR:
sou03009
]
Prokaryotic type
GTPases
PDM29_15640 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
MMR_HSR1_Xtn
cobW
Ras
PduV-EutP
Roc
TniB
ABC_tran
NTPase_1
NB-ARC
KTI12
WH_MCM3_C
Motif
Other DBs
NCBI-ProteinID:
WNH51764
LinkDB
All DBs
Position
3495127..3496524
Genome browser
AA seq
465 aa
AA seq
DB search
MLPLVALVGRPNVGKSTIFNALTRTRDALVHDQPGVTRDRNYGVCRLDEDNHFLVVDTGG
IAEDEEGLAGATARQARAAAGEADLILFVVDAREGTSALDDEILSWLRKLSRPTLLLINK
IDGTDEDAVRSEFSRYGFSEMLTVSAAHRQGLDDLLDEVVQRLPEEGSGEELDNDPARIR
IAFVGRPNVGKSTLVNRILGEERMIASEVPGTTRDSIAVDLERDGRQYRLIDTAGLRRKS
RVDEVVEKFSVVKTLQAIEQCQVAVLMLDASEGVTDQDASVLGAVLDAGRALVVAINKWD
GLTDYQREQAETLVSRKLGFVPWAENVRISAKHGSGLRELFRAIHQAHASATHEFSTSEV
NKALEMAYESNPPPAIRGHVSKLRYVHPGGSNPPTFIVHGTRLKDLPESYKRYLENFFRK
RFKLIGTPVQFIFREGTNPYEGKKNVLTERQIARKRRLMKHVKGK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctttggtcgccctggttggacggccgaatgtcggcaagtccaccattttcaat
gcgctgacccgtacccgtgacgccctggtccatgaccagcccggcgtcacccgggaccgc
aactatggtgtgtgtcgactggacgaggacaaccatttcctcgtggtcgacaccggcggt
atcgccgaggacgaggaaggcctggccggtgcgactgcacgccaggcccgcgcggcggca
ggtgaggccgatctcattctgttcgtggtcgacgcccgtgagggtacctcggcgctcgat
gacgagatcctgagctggctgcgcaagctgtcgcgtcccacgttgctgttgatcaacaag
atcgacggcaccgatgaagacgcggtgcgctcggagttctcgcgctatggcttcagcgag
atgctcaccgtttcggccgcgcatcgccagggtctggacgacctgctcgacgaagtcgtg
cagcgcctgccggaagagggcagcggcgaagagctggacaacgatcccgcgcgcatccgc
attgccttcgtcggccgcccgaacgtgggcaagtcgaccctggtcaaccgcatcctcggc
gaagaacgcatgatcgcctcggaagtgccgggtaccacgcgcgattccatcgccgtggac
ctggagcgcgacggtcgccagtaccgcctgatcgacaccgccggtctgcgccgcaagtcg
cgcgtggacgaagtggtcgagaagttcagcgtggtcaagaccctgcaggccatcgagcag
tgccaggtcgccgtgctgatgctggacgccagcgaaggcgtcaccgaccaggacgccagc
gtgctgggcgcggtgttggatgccggccgtgcgctggtggtggcgatcaacaagtgggac
gggttgaccgactaccagcgtgagcaggcggaaacgctggtgtcgcgcaagctcggcttc
gtgccgtgggcggaaaacgtgcgcatctcggccaagcatggctccggcctgcgcgagctg
ttccgcgccatccaccaggcacacgcctcggccacgcatgagttcagcaccagcgaggtc
aacaaggcgctggaaatggcgtacgagtcgaacccgccgccggctattcgcggccacgtg
tccaagctgcgttacgtgcacccgggcggttccaatccgccgaccttcattgtgcacggc
acccgcctgaaggacctgcccgagtcgtacaagcgctacctggaaaacttcttccgcaag
cgtttcaagctgatcggcaccccggtgcagttcatcttccgcgagggtaccaacccgtac
gaaggcaagaagaacgtgctgaccgaacgccagatcgcgcgcaagcgccgactgatgaag
cacgtcaagggcaagtag
DBGET
integrated database retrieval system
