Stenotrophomonas oahuensis: PDM29_15975
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Entry
PDM29_15975 CDS
T10110
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PDM29_15975 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sou01007
]
PDM29_15975 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sou03016
]
PDM29_15975 (hisS)
Enzymes [BR:
sou01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
PDM29_15975 (hisS)
Amino acid related enzymes [BR:
sou01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PDM29_15975 (hisS)
Transfer RNA biogenesis [BR:
sou03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PDM29_15975 (hisS)
Prokaryotic type
PDM29_15975 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
HGTP_anticodon2
tRNA-synt_2d
PUB_1
Motif
Other DBs
NCBI-ProteinID:
WNH51827
LinkDB
All DBs
Position
3557677..3559074
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AA seq
465 aa
AA seq
DB search
MIKPRTPSGTLELLPRQQIAFQRMLDVIRRNYERFGFLPVETPVFELSDVLLTKSGGETE
RQVYFAQSTGALANAAEAGDKSLPELALRFDLTVPLARYVAEHEHDLTFPFRRYQMQRVY
RGERAQRGRFREFYQCDIDVIGKDTLSTRYDAEVLAVIHAVFSELRIGDFSVQLNNRKLM
RGFFESLGVADGERQLAVLREVDKLDKRGADYVRETLTGEGFGIPAEQVERILAFVAVRS
TSHADALVQLDALVADAAASETLKVGVAELREVLTLVKALGVPETSYCLNFSIARGLDYY
TGTVYETTLTDHPQIGSICSGGRYEDLASHYTKSKLPGVGISIGLSRLFWQLQEAGLIAG
IEDSSVHALVALMDDNGLPDSLDLARRLRAGGINTEVQMEPKKIGKQFQYAAKAGIRFVV
LVGEDELARGVVAVKDLLREQQFEVAREELASALQVELEQTRAMA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagccccgtacgccgtccggcaccctggaactgctgccgcgccagcagatcgcg
ttccagcgcatgctggacgtcatccgccgcaattacgagcggttcgggttcctgccggtc
gaaacgccggtgttcgaactgtcggatgtgctgctgaccaagtccggcggtgaaaccgag
cgccaggtgtacttcgcgcagtccaccggtgccctggccaacgcggccgaagccggcgac
aagagcctgccggaactggccctgcgtttcgacctgaccgtgccgctggcccgttacgtg
gccgagcacgagcacgacctgaccttcccgttccgccgttaccagatgcagcgcgtgtac
cgcggcgagcgcgcccagcgcggtcgtttccgcgagttctaccagtgcgacatcgacgtg
atcggcaaggacacgctgagcacgcgttacgacgccgaagtgctggcggtgatccacgcg
gtgttctcggaactgcgcattggtgatttctcggtacagctgaacaaccgcaagctgatg
cgcggcttcttcgaaagcctgggcgtggccgacggtgagcgccagctggcggtgctgcgt
gaagtggacaagctggacaagcgcggcgcggactacgtgcgtgaaacgctgaccggcgaa
gggtttggtattcccgccgagcaggtggaacgcatcctggcgttcgtggcggtgcgttcg
accagccacgccgatgcgttggtgcagctggacgcgctggtggcggacgcggccgcaagc
gaaacgctgaaggtgggcgtggccgaactgcgcgaggtgctgacgctggtgaaggcactg
ggtgtgccggaaacgtcgtactgcctgaacttctcgattgcgcgcggcctggattactac
accggcacggtgtacgaaaccacgctgaccgaccacccgcagatcggctcgatctgctcg
ggcggccgttacgaagacctggccagccactacaccaagtcgaagctgccgggcgtgggc
atttccatcggcctgagccgcctgttctggcagctgcaggaagccgggctgattgccggc
atcgaagacagcagcgtgcacgcgctggtggccttgatggacgacaacggcctgccggat
tcgctggacctggcccgtcgcctgcgcgccggtggcatcaacaccgaagtgcagatggag
ccgaagaagatcggcaagcagttccagtacgccgcgaaggcgggcatccgcttcgtggtg
ctggtgggcgaagacgaactggcccgcggcgtggtggcggtaaaggacctgctgcgcgaa
cagcagttcgaagtcgcccgcgaagaactggccagtgccctgcaggtagaactggaacag
acccgcgcgatggcgtga
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