Stenotrophomonas oahuensis: PDM29_16060
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Entry
PDM29_16060 CDS
T10110
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sou03000
]
PDM29_16060
Transcription factors [BR:
sou03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PDM29_16060
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_IclR
HTH_31
HTH_10
HTH_Crp_2
HTH_23
TetR_N
HTH_3
HTH_11
MarR_2
Fe_dep_repress
HTH_20
TrmB
MarR
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
WNH51843
LinkDB
All DBs
Position
3579832..3580929
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AA seq
365 aa
AA seq
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MKKERSTARGAATKASSSKGAAAPTSRASGRAVTVTDIAEAIGVSRATVSLVLRGSPLVN
VDTRARVEAELRKQRYVYNRSAANLRRRTSSSVALVINDLSNPFFAEFASGVDEALGAKG
YVTLLGSTGESPQRQQAVVSTLMEHTPAGLILSPAEGTDATELRQALGFNANVLLFNREL
KGGDWDFLTLDNQQGAYLATKHLIERGHRRIAFFGGHADSSSCHQRRAGYKQALGEAGLQ
VPPQWMIESAPNRLEAAARTGELFAEGAQPTAAVCYNDTVALGLMLGLASRGVRPGTEFA
VTGFDDISEAAVALPPLTTLTVNPRERGRQAAELLLHRLDNPTAPPQRTVAPVQLRIRDS
SGTAA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaacgttctactgccagaggggccgccacgaaggcatcgtcttcgaagggg
gccgctgcacccacgtctcgcgcaagcgggcgtgcggtgaccgtgaccgacattgccgag
gccatcggggtctcgcgcgcgaccgtgtcgctggtgctgcgtggcagcccgctggtcaac
gtggacacccgtgcgcgggttgaggccgagctgcgcaagcagcgctacgtctacaaccgc
agcgcagcgaatctgcgccgtcgcacctccagcagcgtggcgctggtgatcaacgacctg
tccaacccgttcttcgccgaattcgcttccggcgtggacgaggcgctcggcgcgaagggc
tacgtgactctgctgggcagcaccggcgagtcgccgcagcgccagcaggcggtggtatcc
acgctgatggaacacaccccggccgggttgatcctgtcgccggccgagggcaccgacgcc
accgagctgcgtcaggcgctgggcttcaatgccaacgtgctgctgttcaaccgcgagctg
aaaggcggggactgggacttcctgaccctggacaaccagcagggggcctacctggccacg
aagcacctgattgaacgggggcatcgccggattgccttcttcggtggccatgccgactcc
agctcctgccatcagcgccgtgccggctacaagcaggcgctgggcgaggccgggctgcag
gtaccgccgcagtggatgatcgaatccgcgcccaaccggctggaagcggccgcacgcacc
ggcgaactgttcgccgagggcgcgcagccgaccgcggcggtctgctacaacgacaccgtg
gcccttggcctgatgctgggccttgcttcacgtggcgtacgccccggcaccgagttcgcg
gtgaccggcttcgatgacatttccgaagcagcggtggccctgccgccgttgaccaccctg
accgtgaatccgcgcgagcggggccggcaggccgccgagctgctgctgcaccggctcgac
aaccccaccgcaccgccacagcgcaccgtggctccggtgcagcttcgcatccgcgacagc
agcggcaccgccgcctga
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integrated database retrieval system
