Stenotrophomonas oahuensis: PDM29_16080
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Entry
PDM29_16080 CDS
T10110
Name
(GenBank) glycoside hydrolase family 2 protein
KO
K01192
beta-mannosidase [EC:
3.2.1.25
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00511
Other glycan degradation
sou04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
PDM29_16080
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PDM29_16080
Enzymes [BR:
sou01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.25 beta-mannosidase
PDM29_16080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_N2
Mannosidase_ig
Ig_mannosidase
Glyco_hydro_2
Glyco_hydro_2_C
Big_3_2
Glyco_hydro_2_N
Bbp16
DUF7490
Motif
Other DBs
NCBI-ProteinID:
WNH51847
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All DBs
Position
3584620..3587232
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AA seq
870 aa
AA seq
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MRRLGVLLLTLLWALPAAATPLSAQWSFRLLPGNAQASAHPEVTQWRSAQIPGSVHTDLL
AHELIPNPYAGAPEAGLQWIGLADWEYQARFDVDAATLARKHAELTFEGLDTFAEVTLND
RPLLKANNSHRSWRARVDGRLKAHDNTLRIVFRSPITTLLPRVQAMPHKIAGNYPSPYGD
EPKDAMVGNFVRKPGYHFGWDWGPRYVTAGIWRPVTLDSWDVQRITDVAVQTQALSEQRA
ELQVDVEVERAAAGTAQVQVTLIDPDGSVAATVEQEASLRKGRQVVSVPVQVANPRRWWP
VGYGEQARYTVRTVVDAGKQGRVEQQLRTGLRTVELRREVDRDGGQGFAFVINGVPIFAK
GANVIPFDAFPARVDAARLRRDLTAARDANMNMVRNWGGGYYEDSTFFDIADELGLLVWQ
DFMFGGGMQPGYDPAFRQNVVAEARDNVRRLRRHPSIVLWCGNNEEETAWKDWGHGRDLT
AADPVFAKKVWQGYVDLFGHDLRQVVSEHGLGVPYWSSSPSNDLDEKANDSTRGDKHYWQ
VWGNPALPVQAYLRETPRFMSEYGLQAWPSLRTLQGIIPADQQQVDSPVVKAHQKFMAGE
GNQRLLQYIEREFGTPRNFDDFVYLSQVTQAEGIALAALHHRASRPYTMGSLYWQLNDVW
PGASWSSVDHDGRWKALHFHAKRFFAGHAVAALRDEGVTRVSLLNDRAEPLRGAWRLRVM
DVDGRVRSDERKAVTVPPLAALEVGRFTDAQLLGKADPRRTVAVAELLDGEQVVSRQVVY
FAAAKDMRLPQAKIVSRWVREGDDSVLELRSAQLARGVWVEFDGFDAVLDDNALDLVPGE
PVRIRVKADQSAKALADALRVRSVAEAMGR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgattgggcgttctgcttctcactctgctttgggcgctgccagccgcagccacc
ccgctgtcagcccaatggtccttccgcctgctcccaggcaacgcccaggcaagcgcccac
cctgaagtcacccaatggcgcagtgcccagatcccaggttcggtccacaccgacctgctc
gcacacgagttgatacccaacccctacgcaggcgcacccgaagccggcctgcaatggatc
gggctggccgactgggaataccaggcccgcttcgacgtcgacgccgccacgctggcccgc
aaacacgccgaactgacgttcgagggcctggacacctttgccgaggtcaccctcaacgac
cgcccgctgttgaaagccaacaacagccaccgcagctggcgcgcccgcgtcgatggtcgc
ctgaaggcgcacgacaacaccctgcgcatcgtgttccgttcaccgatcaccacgctgctg
ccccgcgtgcaggcgatgccgcacaagatcgccggcaactatccgtctccctacggcgat
gaacccaaggacgcgatggtcggcaactttgtgcgcaagcccggttatcacttcggctgg
gactggggcccgcgttacgtgacggcgggtatctggcgtccggtcacgctggacagctgg
gacgtgcagcgcatcaccgatgtggcggtgcagacgcaggcgctgagtgagcagcgcgcc
gagctgcaggtggacgtggaagtggagcgagctgcggccggcaccgcccaggtacaggtg
accctgatcgacccggatggcagcgtcgccgccaccgtcgaacaggaggccagcctgcgc
aagggcaggcaggtggtttccgtacccgtgcaggtggccaacccgcgtcgctggtggccg
gtgggctacggcgaacaggcgcgttacaccgtacgcacggtggtcgacgccggcaagcag
ggcagggtggagcagcaactgcgcaccggcctgcgcacggtggagttgcgccgcgaggtc
gaccgcgatggcggccagggcttcgccttcgtcatcaacggcgtgccgatcttcgccaag
ggcgcgaacgtgattccgttcgacgcgttcccggcccgggtggacgccgcacgtctgcgc
cgcgacctcaccgctgcacgcgacgccaacatgaacatggtgcgcaactggggcggtggc
tactacgaggattccaccttcttcgacatcgccgacgagctcggccttctggtctggcag
gacttcatgttcggcggcggcatgcagcccggctacgaccccgcgttccgccagaatgtg
gtggccgaagcacgcgacaacgtgcgccggctgcgccgccacccgagcatcgtgctgtgg
tgtggcaacaacgaagaagagaccgcgtggaaggattggggccacggccgcgatttgacc
gcggccgacccggtgttcgcgaagaaggtgtggcagggctatgtggatctgttcggccac
gacctgcgccaggtggtcagcgagcacggtttgggcgtgccgtactggtcgagctcgccg
agcaacgacctggacgagaaagccaacgactccacccgtggcgacaagcactactggcag
gtgtggggcaatccggcgctgccggtgcaggcgtatctgcgcgagaccccgcgtttcatg
tccgagtacggcctgcaggcgtggccgtcgctgcgcacgctgcaggggatcattcccgcc
gaccagcaacaggtggacagcccggtggtgaaggcgcaccagaagttcatggcgggcgag
ggcaatcagcgcctgctgcagtacatcgagcgtgagttcggcacaccgcgcaatttcgat
gacttcgtctacctgagccaggtgacccaggccgaaggcattgccctggccgcgctgcat
caccgcgcctcacgcccgtacaccatgggctcgctgtactggcagctcaacgatgtgtgg
ccgggcgcgtcgtggtcgagtgtcgatcacgacggtcgctggaaagcgctgcatttccat
gccaagcgcttcttcgccgggcatgccgttgccgcgctgcgcgacgaaggtgtgacccgg
gtcagtctgcttaacgaccgtgccgagccgctgcgcggggcgtggcggttgcgggtgatg
gatgtggatggccgcgtgcgtagtgatgagcgcaaggcggtgacggtgccgccgttggct
gcgttggaggtcgggcggttcaccgatgcgcagctgctgggcaaagcggatccgaggcgc
accgtggccgtggcggagctgctggacggcgagcaggtggtatcgcggcaggtggtgtat
ttcgctgcggccaaggacatgcgtctgccgcaggcaaagatcgtcagtcgctgggtccgc
gagggtgatgacagcgtgctggagctgcgctctgcgcagctggcgcggggggtgtgggtg
gaatttgacgggtttgatgccgtactggacgacaacgcgctggacctggtgccgggggaa
ccggtgcggatccgggtgaaggcggatcagagtgccaaggcgttggccgacgcgttgcgg
gtgcggagcgtggccgaggcaatgggccggtaa
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