Stenotrophomonas oahuensis: PDM29_16190
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Entry
PDM29_16190 CDS
T10110
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00220
Arginine biosynthesis
sou00240
Pyrimidine metabolism
sou00250
Alanine, aspartate and glutamate metabolism
sou01100
Metabolic pathways
sou01110
Biosynthesis of secondary metabolites
sou01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PDM29_16190 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PDM29_16190 (carB)
00220 Arginine biosynthesis
PDM29_16190 (carB)
Enzymes [BR:
sou01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PDM29_16190 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WNH51869
UniProt:
A0ABY9YNQ7
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All DBs
Position
3610387..3613629
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AA seq
1080 aa
AA seq
DB search
MPKRTDLKTILIIGAGPIVIGQACEFDYSGAQACKALRDEGYRVVLVNSNPATIMTDPEM
ADAVYIEPINWQTVEKIIAKEKPDALLPTMGGQTALNCALDLADNGVLEKYNVELIGAKR
EAIRMAEDRELFRVAMGEIGLECPSAAVAHTLDEALEIQTRVGYPTIIRPSFTLGGSGGG
IAYNREELVEIVTRGLELSPTTEVLVEESVLGWKEFEMEVVRDTADNCIIVCSIENLDPM
GVHTGDSITVAPAQTLTDKEYQRLRDASIAVLRKIGVDTGGSNVQFGINPETGRVVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELKNEITGGLTPASFEPSIDYVVTKIP
RFAFEKFPAADARLTTQMKSVGEVMAMGRTFQESVQKALRGLETGKVGFDPTELDLSSED
DLQTLRRELKAPGPERLFYVADAFRAGMSVEEIYNLSFIDPWFLDQIEEIIAEEAKVAAD
GIDALDAARLRKLKRAGFSDARLAQLTGTNEAAVRALRRAHKVRPVYKRVDSCAAEFATG
TAYLYSTYEDECEAAPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPLTLEDVLEIVELEQPKGVIVQYGGQTPLKLARALEANGVP
VIGTSPDSIDLAEDRERFQQLVEKLGLKQPPNRIARNDQEALLLAREIGYPLVVRPSYVL
GGRAMEIVYGESDLARYVRDAVKVSNDSPVLLDRFLDNAVECDVDIIADKDGNVLIGGVM
EHIEEAGVHSGDSSCSLPPYSLSAETQAELRRQVVELAKALNVVGLMNTQFAIQAGEDGN
DIVYLLEVNPRASRTVPFVSKATGMALAKIAARCMAGKTLAEQGATKEIVPDYYSVKEAI
FPFAKFQGVDPILGPEMRSTGEVMGVGRSFSAAFARAQEAGGIKAPPQGKAFVSVRDPDK
KRVLPVAQALLERGYTLVATRGTAAWLQQHGMDCEIVNKVVEGRPHIVDLIKNGEIVYIV
NTTEGRAAINDSFSIRREALQHRVTYSTTIAGAKALVQSLEFRGTGPVWSLQELHKELNA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcactgacctcaagaccatcctcatcatcggtgccggcccgatcgtcatc
ggccaggcctgcgagtttgactactccggcgcacaggcctgcaaggcgctgcgtgacgag
ggttaccgcgtggtgctggtcaacagcaatccggccaccatcatgaccgacccggagatg
gccgacgcggtctacatcgagccgatcaactggcagacggtcgagaagatcatcgccaag
gaaaagcccgacgcgctgctgccgaccatgggcggccagaccgcgctgaactgcgcgctg
gacctggccgacaacggcgtactcgagaagtacaacgtcgagctgatcggtgccaagcgc
gaagcgatccgcatggccgaagaccgcgagctgttccgcgtcgccatgggcgaaatcggc
ctggaatgcccgagcgccgctgtcgcacataccctggacgaagcgctggaaatccagacc
cgcgtcggctacccgaccatcatccgtcccagcttcaccctgggcggcagcggtggcggc
attgcctacaaccgcgaagagctggtcgagatcgtcacccgcggtctggaactgtcgccg
accactgaggtgctggtggaagaatcggtgctgggctggaaggaattcgagatggaggtg
gtgcgcgacaccgccgacaactgcatcatcgtctgctcgatcgaaaacctcgacccgatg
ggcgtgcacaccggtgactcgatcaccgtggctccggcccagaccctgaccgacaaggaa
taccagcgcctgcgcgatgcctccatcgccgtgctgcgcaagatcggcgtggataccggt
ggctcgaacgtgcagttcggcatcaacccggaaacgggtcgcgtcgtcgtcatcgaaatg
aacccgcgcgtgtcgcgttcgtcggcactggcctccaaggccaccggcttcccgatcgcc
aaggtcgccgccaagctggccgtgggttacaccctggacgagctgaagaatgaaatcacc
ggcggcctgaccccggcctcgttcgaaccgtcgatcgactacgtggtcaccaagattccg
cgcttcgccttcgagaagttcccggccgccgatgcccgcctgaccacccagatgaagtcg
gtgggtgaggtgatggcgatgggccgcaccttccaggagtcggtgcagaaggccctgcgc
ggcctggaaaccggcaaggtcggcttcgacccgaccgagctggatctgagcagcgaagac
gacctgcagaccctgcgccgcgagctgaaggctccgggtccggagcgtctgttctacgtg
gctgacgcattccgcgccggcatgagcgtggaagagatctacaacctgtcgttcatcgat
ccgtggttcctggaccagatcgaagaaatcatcgccgaagaagccaaggtcgctgccgac
ggcatcgatgcgctcgacgctgcgcgcctgcgcaagctcaagcgcgccggtttctccgac
gcccgcctggcccagctgaccggcaccaacgaagcggccgtgcgcgcgctgcgtcgtgcc
cacaaggtgcgcccggtgtacaagcgcgtcgactcctgcgccgccgagttcgccaccggc
actgcctacctgtactcgacctacgaggacgagtgcgaagccgcgccgagcaaccgcgac
aagatcatgatcctgggcggcggtccgaaccgcatcggccagggcatcgagttcgactac
tgctgcgtgcacgcggcactggcgctgcgcgaggatggctatgaaaccatcatggtcaac
tgcaacccggaaaccgtgtcgaccgactacgacacctccgaccgcctgtacttcgaaccg
ctgaccctggaagacgtgctggaaatcgtcgaactggaacagccgaagggcgtgatcgtg
cagtacggcggccagaccccgctgaagctggcgcgcgcgctggaagccaacggcgtgccg
gtgatcggcaccagcccggattccatcgacctggctgaagaccgcgagcgcttccagcag
ctggtcgagaagctgggcctgaagcagccgccgaaccgcatcgcccgcaacgaccaggaa
gccctgctgctggcgcgcgagatcggctacccgctggtggtgcgcccgagctacgtgctg
ggtggccgcgcgatggaaatcgtgtacggcgaatccgacctggcccgctacgtgcgtgac
gcggtgaaggtgtccaacgactcgccggtgctgctggatcgtttcctcgacaacgccgtg
gaatgcgacgtcgacatcattgccgacaaggacggcaacgtgctgatcggcggcgtgatg
gagcacatcgaagaagccggcgtgcactcgggcgactcctcgtgctcgctgccgccgtat
tcgctgtcggctgaaacccaggccgagctgcgccgtcaggtggtggaactggccaaggcc
ctgaatgtggtcggcctgatgaacacccagttcgcgatccaggcgggcgaagacggtaac
gacatcgtctacctgctggaagtgaacccgcgtgcctcgcgcaccgtgccgttcgtgtcc
aaggccaccggcatggcgctggccaagatcgccgcgcgctgcatggccggcaagaccctg
gccgagcagggcgcaaccaaggaaatcgtgccggattactactcggtcaaggaagcgatc
ttcccgttcgccaaattccagggcgtggacccgatcctcgggccggaaatgcgctccacc
ggtgaggtgatgggcgtgggccgcagcttcagtgccgcgtttgcgcgcgcgcaggaagcc
ggtggcatcaaggctccgccgcagggcaaggccttcgtttcggtccgcgacccggacaag
aagcgcgtgctgccggtcgcccaggcgctgctggaacgcggttacaccctggtcgccacc
cgtggcaccgccgcgtggctgcagcagcacggcatggactgcgagatcgtcaacaaggtg
gtcgaaggccgtccgcacatcgtcgacttgatcaagaacggtgaaatcgtctacatcgtc
aacacgaccgaaggccgtgccgcgatcaacgactcgttctcgatccgtcgcgaggcgctg
cagcaccgcgtcacctattcgaccaccattgccggtgccaaggcactggtgcaatcactg
gaattccgcgggaccggcccggtctggtcgctgcaggagctgcacaaggagttgaatgca
tga
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