Stenotrophomonas oahuensis: PDM29_16550
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Entry
PDM29_16550 CDS
T10110
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
sou Stenotrophomonas oahuensis
Pathway
sou02020
Two-component system
sou02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDM29_16550
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PDM29_16550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sou03000
]
PDM29_16550
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sou02035
]
PDM29_16550
Transcription factors [BR:
sou03000
]
Prokaryotic type
Helix-turn-helix
Other families
PDM29_16550
Bacterial motility proteins [BR:
sou02035
]
Flagellar system
Flagellar assembly proteins
Others
PDM29_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
HTH_50
AAA_16
AAA_19
bpMoxR
UPF0175
AAA
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WNH51934
LinkDB
All DBs
Position
complement(3696050..3697546)
Genome browser
AA seq
498 aa
AA seq
DB search
MSESRILVLDNDAVRAERTVALLEFMDFNPRWVVDAGDFDSSRQRSNDWMAVIIGSLEQS
PATDALFAWAGHGTLPPPVMLIDGDTAAFAQRHGLHEANVWPLEAPLRHAQMEALLRRAS
LKRLDAEHQAGAAQDNGPTGDGAAVTELRQMIEQVAAFDTTVLVLGESGTGKEVVSRSIH
QRSPRRDGPFVAINCGAIPADLLESELFGHEKGAFTGALSARKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGNQTIRCNVRVVAATHRDLESRIAEGKFREDLFYRLN
VFPIEVPSLRDRTEDLPALVGTIAAQLARTGRGEVRFSPEALQALAAYEWPGNVRELTNL
VERLAVLHPGGTVRVQDLPARYRGDFNPAAPVAAPAPAAGSDERLDLRSFSFHTPGTGTG
TAPSAQDPAAARTPALPDDGLDLRNHMANIELTLINEALERTQGVVAHAAQLLGLRRTTL
VEKLRKYGIERDQTELAG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcgcgcatcctggtactggacaacgacgccgtgcgcgccgagcgcaccgtc
gcccttctggagttcatggatttcaatccgcgctgggtggtcgatgccggcgatttcgac
agcagccgccagcgcagcaatgactggatggccgtcatcatcggcagtctcgagcagagc
cctgccaccgacgcgctgtttgcatgggccggccacggcacgctgccgccgccggtgatg
ctgatcgacggtgataccgccgctttcgcgcagcgtcacggcctgcacgaagccaatgtc
tggccactggaggcgccgctgcgccacgcgcagatggaagccctgctccgccgcgccagc
ctgaagcggctggacgccgaacaccaggccggtgccgcacaggacaacggccccaccggt
gacggtgcggcagtgaccgaactgcgtcagatgatcgagcaggtggcggcattcgacacg
acggtgctggtcctcggcgaatcgggcaccggcaaggaagtggtgtcgcgctccatccat
caacgctcgccgcgacgcgacggcccgttcgtggcaatcaactgtggcgcgattccggca
gatctgctggaaagtgaactgtttggtcacgaaaaaggggccttcaccggcgcgctgagt
gcgcgcaaaggccgctttgagatggccgagggcggcaccctgctgctcgacgaaatcggc
gacatgagcctgccgatgcaggtgaaactgctgcgtgtgctgcaggagcgcagcttcgaa
cgcgtgggcggcaaccagaccatccgctgcaacgtgcgcgtggtcgcggcaacccaccgt
gatctggaatcgcgcattgccgaaggcaagttccgcgaggatctgttctaccgcctcaac
gtgttcccgattgaagtgccctcgctgcgcgaccgcaccgaagaccttcctgccctggtc
ggcaccatcgccgcacagctggcgcgcaccgggcgtggtgaagtgcgtttcagcccggaa
gccctgcaggcgctggccgcctacgagtggccgggcaatgtgcgcgaactgaccaacctg
gtcgagcgcctggccgtgctgcatcccggtggcacggtgcgggtgcaggacctgccggcg
cgttaccgcggcgatttcaatcccgcagcaccggtggctgcgccggcaccggcagccggc
agtgacgaacgcctggacctgcgcagtttctcgttccataccccgggcaccggcaccggc
accgcgccgtccgcccaggatccggccgctgcacgcacacccgccctgcccgacgacggc
ctggatctgcgcaaccacatggccaacatcgagctgacgttgatcaacgaagcactggaa
cgcacccagggcgtggtcgcccacgccgcccagcttctcggcctgcgccgcaccaccttg
gtggaaaagctgcgcaagtacggcatcgaacgcgaccagaccgaactggccggctga
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