Stenotrophomonas oahuensis: PDM29_17945
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Entry
PDM29_17945 CDS
T10110
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
sou Stenotrophomonas oahuensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
Peptidase_S8
PATR
Trypan_PARP
Pertactin
Motif
Other DBs
NCBI-ProteinID:
WNH52194
LinkDB
All DBs
Position
complement(4030273..4033287)
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AA seq
1004 aa
AA seq
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MAYTKRIAWNRATGRFDVVLDYTAAAEQDVARRLPKAWLMGAATLTGLTGTAAAAPSTST
YQKASDDQLNGLDGESIRIFHYDTGINPLSLTDADAATALGEPDMTGFADNVLKVDGQYV
GLFSKTENGQTVENQMSYQALHGGGHGAWMSYSLLHIVPDATLLTGSGSTVDDWWNAFAT
ASDPDGFGARTMSASYFVWYPSQITDDRLNSVPTSWRNAWREIKDNDALILLAAGNSGSG
NTQVVQPFVYGTVPLEDAQYYGNYVVVVATPGGNTTGQYNWSRQNCGHAMYWCLAAVEGT
LQRDASGNILRAANGHWSYSLAGGTSWSAPNANAITALVAERYPWMSARNLMEVVLGTAT
DMSTTDRSANANLLAGINAYSGWGEINPDAALGGYGQFAWGQSKLDIPAGVTAYFDNNIG
DDRADTVTTGIYNNDAASLGGVSRTLAGGFDKTGSGTLVLNGNNTYRGSGNVRAGRVVVN
GTNNQAAFTVAPGAVLQAGDNTQGMSVGSLDNAGTLALPHRGTEFDVLGDYAGQDLSRLW
VDAYLADAATTETALLHIGGSSTGSTQVSIDNAGGPGGLIARTEAQSWGHKVIQVDGTSG
AEFVQAGRVVAGAYDYQLRRGGANSADAANRNWYLSSSIEAVPVPVPEPMPTPTPEPTPT
PVPTPEPSPAPVEPVPSPMPAEPVPLPGDGQQMLRPEAAAYLASAIASRSMFNDDRPGRV
TGDRYSPTRWRDKGHRDIWASVRGNEHRFNASGGAAVDGRWQTLQVGTSQMLSDQWSVGV
KGGQGQYDVDSTSRSTGYRARGRSTGVMLGVYADYRQSLDDATGLSLAFDSSGTRMRHRI
QGDGLAQERFRSTDWSTSAEAGYGFALNASLDGKVVLRPHVGLEWSRSGPSALTEANGTE
LRFERSAPLRSRVGLDVMGDFHAGKAIRFQPYIGAQLIRQGSKTSLLMDGSEVEIDGSEQ
ITQFRAGVQARLSTNMRAEIGLRRDTGNGGYRQTTAKAELSMSF
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacacgaagcgcattgcctggaacagggcaacgggccgatttgatgttgtgctc
gattacacggctgcagcggagcaggacgtagcccgacggctgccgaaggcctggctgatg
ggcgcggccacactgaccggcctcaccggcacagcggcggcagcacccagcacgtccacc
taccagaaggcttccgacgaccagctcaacgggctggacggggaaagcatccggatcttc
cactacgacaccggcatcaatccgctttcgctgacggacgcggacgccgcgaccgcactg
ggcgaaccggacatgaccggcttcgcagacaacgtgctcaaggtcgacggtcagtacgtc
ggtttgttctcaaaaaccgagaacgggcagacggtcgagaaccagatgtcctaccaggcc
ctgcacggcggtggccacggcgcgtggatgagctattcgctgctgcacattgtgccggac
gccacgctgcttaccggtagtggcagcacggtggacgattggtggaatgccttcgcgacc
gccagcgacccggatggcttcggtgcgcgcaccatgagcgcgtcctatttcgtgtggtac
ccgtcgcagatcaccgatgatcggctgaactccgtgcccacgtcttggcgcaatgcgtgg
cgcgagatcaaggacaacgatgccctgatcctcctggccgcaggtaacagcggcagcggc
aatacccaggtagttcagccgttcgtgtacggcaccgtgccactggaagatgcgcagtac
tacggcaactacgtggttgtcgtggccacgccgggtggcaacaccacgggccagtacaac
tggagccggcagaactgcggccatgccatgtactggtgtctggcggcggtggaaggcacc
ctgcaacgcgatgccagtggcaatatcctgcgcgcggcgaacggccactggtcgtacagc
ctggccggcggcacctcctggtcggcacccaatgccaatgcgatcaccgcgctagtggcc
gagcgttacccgtggatgtccgcgcgcaacctgatggaagtggtgctgggtaccgccacc
gacatgagcaccaccgaccgcagcgcaaatgcgaacctgctggccggtatcaacgcgtat
tccggttggggcgagatcaatccggatgccgccctgggtggctacggccagtttgcctgg
ggacagagcaagctggatatcccggctggcgttaccgcgtacttcgacaacaacattggt
gacgaccgcgctgacaccgtcaccaccggcatctacaacaatgatgcggccagcctgggc
ggcgtgagccgcacgttggccggcggcttcgacaagaccggttcgggcacgctggtgctc
aacggcaacaacacctaccgcggcagcggcaacgtgcgcgcgggcagggtggtggtcaat
ggcaccaacaaccaggcggcattcaccgtggcacccggcgcggttttgcaggcgggtgac
aacacgcaaggcatgtccgtgggctcgctggacaatgccggtacgctcgccttgccacac
cgtggcactgaattcgacgtactgggtgactacgccggtcaggatctcagccggctgtgg
gtggatgcttacctcgccgatgccgcgactaccgaaacggcgctgctgcacattggcgga
agcagcactggcagtacccaggtgagcatcgacaacgccggtggtccgggaggacttatc
gcccggaccgaggcacagtcctgggggcacaaggtcatccaggtggacggcacgtcgggc
gccgagttcgtgcaggctggccgcgtcgtggccggtgcctacgactatcagttgcgtcgt
ggcggtgccaacagcgcggatgcagccaacaggaactggtatctgagcagcagcattgaa
gctgtgccggtaccggtacccgaaccgatgccgacgccgacgccggaacccaccccgact
ccagtgccgaccccggaaccgtctcctgcaccggtcgaacccgtgccttcgccgatgccg
gcagagccggtgccgctgccgggcgacggccagcagatgctgcgcccggaggccgctgcc
tatctggccagcgccattgcatcccgctcgatgttcaacgatgaccggccgggccgcgtt
acgggtgaccgttacagccccacgcgctggcgagacaaaggccaccgcgatatctgggcc
agcgtgcgcggcaacgagcaccgcttcaatgcgtccggtggcgcagccgtggatgggcgt
tggcagaccctgcaggtcggcaccagccagatgctcagcgaccagtggtcggtgggcgtg
aagggcggacaggggcagtacgacgtggattccacctcgcgcagcaccggctaccgcgcc
agggggcggtcgactggcgtcatgctgggggtctatgcggactatcggcagtcgctggat
gatgcgaccggcttgagtctggcgtttgattcgtccggtacccggatgcgtcaccgcatt
cagggcgacggcctggcccaggagcgtttccgcagcacggactggagcacctcggccgag
gccggctatggcttcgctctcaacgcctcgctggacggcaaggtggtgctgcgaccgcac
gttggattggagtggtcccgttcgggtccgtcggcattgaccgaggccaatggcaccgaa
ctgaggtttgaacgaagcgcgccgctgcggagcagggtgggcctggacgtcatgggtgac
ttccacgcgggcaaggccattcggttccagccctatatcggagcacagctgatccggcag
ggctcgaagacatcgctgctgatggacggcagcgaagtggagatcgatggctcggagcag
atcacgcagttccgcgcaggtgtgcaggcccgcctgtcgaccaatatgcgtgcagagatc
ggcctgcgccgcgacacaggcaatggcggctaccgccagaccaccgccaaggcggaactc
tccatgagcttctag
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