Stenotrophomonas oahuensis: PDM29_19030
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Entry
PDM29_19030 CDS
T10110
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00330
Arginine and proline metabolism
sou01100
Metabolic pathways
sou01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PDM29_19030
Enzymes [BR:
sou01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PDM29_19030
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WNH52398
LinkDB
All DBs
Position
complement(4287580..4289868)
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AA seq
762 aa
AA seq
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MYFKSLDYPVIVIDADYESPRIGGILIRALVEELRKNEQRVLCGLTLADAQAGARTYVAA
SAVLISIDGTEDEPTEFQRLLGFLREQSARRGGLPVFLYGERRTIEKVPSKLLKYVHGYI
FLFEDTKSFIARQVMRAAEDYMHTLLPPFFKALIHHAAESNYSWHTPGHAGGVAFTKSPV
GRAFHQFYGENTLRSDLSISVPELGSLLDHSGPIKEAENEAARNFGADHTFFVTNGTSTA
NKIVWHGTVGRGDVVFVDRNCHKSLLHALIMTGGVPVYFTPSRNAHGIIGPISLDQFTPE
ALLQAIAANPLASQAFQAGSKPRIAVVTNSTYDGLCYNAEKIADEIGSAVDFLHFDEAWY
AYAAFHPFYENHYGMAKGKAREQDAIIFTTHSTHKLLAAFSQASMIHVRNAATRELDAER
FNEAFMMHTTTSPHYGVIAACDVASKMMEGPAGESLVQEMHDEAIAFRRAMLHVRDDLGR
DDWWFSVWQPDKLERSLAKGDAPAPLVAKREEWYLQPDAYWHGFDGLVEDYVLIDPIKVT
LLTPGLSISGEVAEHGIPAAVLSKFLWTRGITVEKTNLYSVLFLFSMGITKGKWSTLVTE
LMAFKELYDHNAPLSRALPDLAADYGAIYDGWGLRDLCQALHDFNREFAVAKVMREMYVD
LPTPVMTPAKAYDHLVRGEIERVDIEALSGRIAGTMLVPYPPGIPTIMPGERFGASDEPI
IQSLRIAREQNARFPGFESDVHGLIIDRSGDAPSYKVEVLKV
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
gtgtacttcaaatcattggattacccggtcatcgtcatcgatgccgactacgagtcgccg
cgcattggtggcattctgatccgcgcgctggtggaggagctgcgcaagaacgagcagcgc
gtgctctgcgggctgactctggcggacgcccaagccggggcgcgcacctatgtggctgcg
tcggcggtgctgatctccatcgacggcaccgaggatgagcccactgagttccagcgcctg
ctcggtttcctgcgtgagcagagcgcgcgccgaggaggcttgccggtgttcctgtacggt
gagcgccgtaccatcgagaaggtgccgagcaagctgctgaagtacgtgcacggctacatc
ttcctgttcgaggacaccaagagcttcattgcccgccaggtgatgcgtgcggccgaagac
tacatgcatacgctgttgccgccgttcttcaaggcgctgatccatcacgcggccgagtcc
aactactcctggcatacgccggggcatgccggtggcgtggccttcaccaaatcacccgtg
gggcgcgcgttccatcagttctatggcgagaacacgctgcgcagcgatctttccatatcg
gttcccgagctgggctcgctgctcgaccatagcgggccgatcaaggaggccgagaacgag
gccgcacgcaactttggtgcagaccacaccttcttcgtgaccaatggcacctccaccgcc
aacaagattgtctggcacggcacggtggggcgcggcgatgtggtgttcgtggaccgtaac
tgtcacaaatcgctgttgcatgcgttgatcatgaccggcggcgttccggtctacttcacc
cccagccgtaatgcgcacggcatcatcgggccgatcagcctggatcagttcacgcccgag
gcgctgctgcaggcgattgccgccaatcccctggccagccaggcgttccaggcgggttcc
aagccgcgcatcgccgtggtcaccaattccacctacgacgggctgtgctacaacgccgag
aagattgccgacgagatcggtagcgcggtggacttcctgcactttgacgaggcttggtac
gcctacgcggccttccatccgttctatgagaaccattacggcatggccaagggcaaggcg
cgcgagcaggatgcgatcatcttcaccacccattccacgcacaagctgctggccgcgttc
tcgcaggcgtcgatgatccacgtgcgcaatgccgccacccgtgagctggatgccgagcgt
ttcaacgaggcgttcatgatgcacaccaccaccagcccgcattacggggtgattgctgcc
tgtgatgtggcctcgaagatgatggaggggccagccggcgaatcactggtgcaggaaatg
cacgatgaggccatcgcgttccgccgtgccatgctgcatgtgcgcgatgatctggggcgc
gatgactggtggttcagcgtctggcagccggacaagctggagcgttcgctggccaagggc
gatgcgccggccccgctggtggccaagcgcgaggaatggtatctgcagccggatgcgtac
tggcacggcttcgacgggctggtggaagactacgtgctgatcgacccgatcaaggtcacc
cttctgaccccggggttgtcgatcagtggcgaggtggccgagcatggcatccccgccgcg
gtgctcagcaagttcctgtggacgcgcggaatcaccgtggagaagaccaatctgtactcg
gtgctgttcctgttctcgatgggcatcaccaagggcaagtggagcaccctggtgaccgag
ctgatggcgttcaaggagctgtacgaccacaacgcgccgctgagtcgggcgctgccggac
ctggccgccgactatggagccatctacgacggctggggcctgcgcgacctgtgccaggcc
ctgcatgacttcaaccgcgagttcgcggtcgccaaggtgatgcgcgagatgtacgtggac
ctgcccacgccggtgatgaccccggccaaggcttacgaccatctggtgcgcggggagatc
gagcgggtcgatatcgaggcgctgagcgggcgcatcgccggcaccatgctggtgccgtac
ccgccgggcattccgaccatcatgccgggggagcgcttcggggcctccgatgagcccatc
atccagtcgctgcgaattgcccgcgagcagaacgcccggttcccgggtttcgagtcggac
gtgcacgggcttatcatcgaccgcagcggcgacgcgccgagctacaaggtggaggtgctg
aaggtctga
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