Stenotrophomonas oahuensis: PDM29_19510
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Entry
PDM29_19510 CDS
T10110
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PDM29_19510 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sou03019
]
PDM29_19510 (orn)
03009 Ribosome biogenesis [BR:
sou03009
]
PDM29_19510 (orn)
Messenger RNA biogenesis [BR:
sou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PDM29_19510 (orn)
Ribosome biogenesis [BR:
sou03009
]
Eukaryotic type
Pre-60S particles
RNases
PDM29_19510 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FimA
Annexin
Motif
Other DBs
NCBI-ProteinID:
WNH52480
UniProt:
A0ABY9YNJ6
LinkDB
All DBs
Position
complement(4364525..4365094)
Genome browser
AA seq
189 aa
AA seq
DB search
MADNGAEGERLIWIDLEMTGLDTDNDSIIEIATVVTDAQLNVLAEGPEFAIHHPVERLEA
MDEWNRNQHRRSGLWQRVVESQVTLGQAEAATVNFLAQWIRAGASPMCGNSICQDRRFLH
REMPRLEKYFHYRNLDVSTVKELARRWAPTVAAGVGKTASHTALSDVHDSIAELRHYRQF
MGALSGLPA
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacggcgcggaaggcgaacgactgatctggatcgacctggaaatgaccggt
ctggataccgacaacgactcgatcatcgagatcgccacggtggtgaccgacgcgcagttg
aacgtgctggcagagggcccggagttcgccattcaccacccggtggagcggctggaagcc
atggacgaatggaaccgcaaccagcaccgtcgttccgggctgtggcagcgcgtggtcgaa
agccaggtcaccctgggccaggccgaggcagcgacggtgaattttctggcgcagtggatc
cgcgccggtgcctcgccgatgtgcggcaactcgatctgccaggaccgccgcttcctgcac
cgtgaaatgccgcgcctggagaagtatttccactaccgcaacctggacgtctccacggtg
aaggaactggccaggcgctgggctccgaccgtggccgccggggtgggcaagaccgccagc
cataccgcgctgagcgacgtgcacgattcgattgccgagctgcgccattaccggcagttc
atgggcgcgttgtcggggttgccggcgtaa
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