Stenotrophomonas oahuensis: PDM29_20040
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Entry
PDM29_20040 CDS
T10110
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
sou Stenotrophomonas oahuensis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sou03036
]
PDM29_20040 (smc)
Chromosome and associated proteins [BR:
sou03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
PDM29_20040 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
YscO
CHX17_C
ABC_tran
DUF1664
BORCS7
Motif
Other DBs
NCBI-ProteinID:
WNH52580
LinkDB
All DBs
Position
complement(4484218..4487721)
Genome browser
AA seq
1167 aa
AA seq
DB search
MRLSTIKLSGFKSFVDPTTLHLPTNMTGVVGPNGCGKSNIIDAVRWVMGESSASRLRGDS
LTDVIFSGSSARKPVSQATVELIFDNTDHTISGEYASFNEISVKRTVSRDGSSNYYLNGT
KCRRRDITDLFLGTGLGPRSYSIIEQGMISQIIEARPEDLRVYLEEAAGISKYKERRKET
ETRIRHTRENLDRLNDLREEIGKQLEHLKRQARQAEQYQALQEERKVKDAEWKALEFRNL
DGRLGSLREALSQEETRLQQFIAEQRDAEARIETSRVRREEAADALSTAQAEVYQVGSTL
ARLEQQIQHQKEMSQRLHKARDETQQALADLGQHISGDEAKLIVLREAVEQAEPQLEQLQ
EENEIKQEALRDAESRLSDWQARWEAHTRSTSEASRAGEVERTRVDYLDRQVLEADRRRE
ALAAERTGLDLDALAEAFEELHLQHETQKAALDGLTEAVESRKEAVAGLQERQRTGQSEL
ADIRKQAQAARGRLSSLETLQQAALGQEQGAAVAWLKQHGLDSGARVGERLTVDSGWENA
VESALGQLIEGVLVDAPEQLVGALAELGEGRIALVSAEQEPLAVAPTSLAAKVQGPTAIR
RLLARLHAADDLEQARALQATLADGDSVITRGGERLGEGWVRVSRSGAAKQGALLREREI
VTLREQIDALQEREATLEEQLAAFRDQLLAGEQQREDAQRQLYLAHRSVSELGGQLQSQQ
GKVEAARTRIDRIEGELAQLIETLDTGREQVREARARLDDAVSSMGDLESVRQALEGERR
QLSDARDQAREAARTVRERSHSLALTLESQRAQLTSLGQALERMSTQRGQLDSRLGELHA
QLDDGDTPVTALEAEHQNALGERVRADRVLGEARTLLEGIDAELRTFEQTRHQRDEQALA
QRERISQRKLDQQALVLSAEQLTASVEKAGFVLQDVINTLPEEARISDWEQAVHQIDGRM
RRLEPVNLAAIQEYGEASQRSDYLDAQNTDLCTALETLEDAIRKIDRETRGRFKDTFDRV
NAGVQQLYPRLFGGGHAYLELTGEDLLDTGVAIMARPPGKRVSSISLLSGGEKAMTAVAL
VFAIFQLNPAPFCLLDEVDAPLDEANVGRLANMVKEMSEKVQFLFVSHNKATMEAAHQLS
GVTMREPGVSRLVSVDLEEAARLAGAA
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtccacgatcaagctctccggcttcaagtcgttcgttgatcccaccaccctg
catctgcccaccaacatgaccggtgtggtcgggcccaatggctgtggcaagtccaacatc
atcgacgccgtgcgctgggtcatgggcgaaagctcggccagccggctgcgtggcgattcg
ctgaccgacgtcattttctccggctcgtccgcgcgcaagcccgtctcacaggccaccgtc
gaactcattttcgacaataccgaccacaccatctccggcgaatatgcctcgttcaacgag
atctcggtcaagcgcacggtcagccgcgatggcagcagcaactattatctgaacggcacc
aagtgccgtcggcgcgacatcaccgatctgttcctgggcaccggcctcggcccgcgcagc
tactccatcatcgagcagggcatgatcagccagatcatcgaagcccggcccgaagacctg
cgcgtctacctggaagaagctgctggcatctccaagtacaaggagcgccgcaaggaaacc
gaaacccgcatccgtcacacccgcgaaaacctcgaccgcttgaacgacctgcgcgaggaa
atcggcaaacagctcgagcacctcaagcgccaggcccgtcaggccgagcagtaccaggcc
ctgcaggaagagcgcaaggtcaaggacgccgagtggaaggcgctggagttccgcaatctc
gacggccgcctgggcagcctgcgcgaggcgctgtcgcaggaagaaacccgcctgcagcaa
ttcattgccgagcagcgcgatgccgaagcccgcatcgagaccagtcgcgtgcgccgtgag
gaagccgctgacgccctcagcaccgcccaggccgaggtgtatcaggtcggcagcaccctg
gcccggctcgaacagcagatccagcaccagaaggaaatgtcgcagcgcctgcacaaggcg
cgcgatgaaacccagcaggcgctggctgacctcggtcagcacatcagcggcgacgaagcc
aagctgatcgtgttgcgcgaagccgttgaacaggccgagccgcagctggagcagctgcag
gaagaaaacgagatcaagcaggaagccctgcgcgacgccgaaagccggctgtctgactgg
caggcgcgctgggaagcccatacccgcagcacgtccgaagcctcgcgcgccggcgaagtg
gaacgcacccgcgtcgattacctcgaccgtcaggtgctggaagccgaccgccgccgcgaa
gccttggctgccgagcgcaccgggctggatctggatgccctggccgaagcgtttgaagag
ctgcacctgcagcacgaaacccagaaggccgcgctggatgggctgactgaagccgtggag
tcccgcaaggaagccgtggcgggcctgcaggagcgccagcgcactggccagagtgaactc
gccgacatccgcaagcaggcccaggccgcgcgtggtcgcctgtcgtcgctggaaaccctg
cagcaggcggccctcggccaggagcagggcgctgccgtggcctggctcaagcagcacggg
ctggactccggtgcccgcgttggcgagcgtctcaccgtcgacagcggctgggaaaacgcc
gtggaaagcgcactcggtcagctgatcgaaggcgtgctggtcgacgctcccgaacagctg
gttggcgcactggccgagctgggcgagggccgtatcgccctggtcagcgccgagcaggag
ccgctcgccgtggctccaacctcgctggccgccaaggtgcagggcccgaccgccatccgc
cgcctgctggcccgcctgcatgccgccgacgatctggaacaggcgcgcgcgctgcaggcc
acactcgccgacggcgattcggtgatcacccgtggcggcgaacgcctgggcgagggctgg
gtgcgcgtgtcgcgctccggcgctgccaagcagggtgcactgctgcgcgaacgcgaaatc
gtcaccctgcgcgaacagatcgacgccctgcaggaacgcgaagccaccctcgaagaacag
ctcgccgcgttccgtgaccagctgctggccggcgaacagcagcgcgaagatgcccagcgc
cagctgtatctggcccaccgcagtgtctccgagctgggtggccagctgcagagccagcag
ggcaaggtcgaggccgcgcgtacccgcatcgatcgcatcgaaggcgaactcgcccagctg
attgaaaccctcgacaccggacgtgagcaggtgcgcgaagcgcgcgcccgtctcgatgac
gcggtcagcagcatgggtgaccttgaatccgtgcgtcaggcgctggaaggtgaacgtcgc
cagctcagtgacgcccgcgatcaggcccgcgaagccgcgcgcacggtgcgcgagcgctcg
cattcgctcgccctcactctggaatcgcagcgcgcccagctcacgtcgctggggcaggcg
ctggaacgcatgagcacccagcgcggccagctcgattcgcgcctgggcgagctgcacgcg
cagctggacgacggcgatacccctgttaccgcacttgaggccgagcaccagaatgccctc
ggcgagcgtgtccgcgccgaccgcgtgctgggcgaggcccgcaccttgctggaaggcatc
gacgccgaactgcgcaccttcgaacagacccgccatcagcgcgacgagcaggccctggcc
cagcgtgaacgcatttcccagcgcaagctcgaccagcaggcgctggtgctgagcgccgag
cagctcactgcctcggtggaaaaggccggcttcgtgctgcaggacgtgatcaacacgctg
cccgaagaggcgcgcatcagcgactgggagcaggccgtgcaccagattgacggccgcatg
cgccgactggagccggtcaatctggccgccatccaggaatacggcgaagcctcgcagcgt
tcggactatctggacgcgcagaacaccgacctgtgcaccgcgctggaaacccttgaagac
gccatccgcaagatcgaccgcgaaacccgtggccgcttcaaggacacctttgaccgggtc
aacgccggcgtgcagcagctgtacccgcgcctgttcggcggcggccacgcctatctggaa
ctgaccggtgaagacctgctcgacaccggtgttgcgatcatggcgcgcccgccgggcaaa
cgcgtgtccagcatctcgctgctgtccggtggcgagaaggcgatgaccgcagtggcgctg
gtgtttgcgatcttccagctcaaccccgcgccgttctgcctgctggacgaagtggacgca
ccgctggacgaagccaacgtcggccgcctcgccaacatggtcaaggaaatgagcgaaaag
gtgcagttcctgttcgtgagccacaacaaggcgaccatggaggcagcccaccagttgtcg
ggcgtcaccatgcgcgaaccgggggtcagccgactggtcagcgtggacctggaagaagcg
gcacgattggcgggcgcggcctga
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integrated database retrieval system
