Stenotrophomonas oahuensis: PDM29_20540
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Entry
PDM29_20540 CDS
T10110
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sou Stenotrophomonas oahuensis
Brite
Enzymes [BR:
sou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PDM29_20540
Ribosome biogenesis [BR:
sou03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PDM29_20540
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WNH52673
LinkDB
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Position
4601146..4602858
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AA seq
570 aa
AA seq
DB search
MSDTPRKPSLNKLSLKRETATEQPKLEERLHKVLAQAGLGSRRALEQRIADGLVKVNGEV
AQTGQSIKSGDKVELDGRGFVATALTETSRVLAYNKPEGEVTTREDPEGRPTVFEALPAL
KGARWIAIGRLDINTTGLLLATTDGELANAMMHPSYEVEREYVVRVRAPEGQEKVPDNIV
DRLARGVALDDGPAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRT
RYGKISLPRELLRGQSQELTAKQVEQLRAELKLEEGAPSALTLQPVIGQRRAAKTTVRVS
REGGRGNAYVNGNNVADEGRELRRFDNVREDRGRGRGGKGGGFKGGLTVSGEAAAKQSQR
PFKQRQDKNSRALPEGNPAAFRSWYVPDGVSTGPSNHRNAGPGAARGPGARGPGAGGQGR
PFGKPKPGAGGGQGRGGFGGEGRGEGRGPYGGEGRSEGRGGYGGQGRPAGAGAGNRGGQG
AQRHPYGHPGNAPSFPSDHANPGASPYGNARPSGNRNAGPRGPGGPGGNRGPGGPGGNRG
PGGRPGGGGRPGGGNRGPGGGGHRGGPRGG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacccctcgcaagccgtcgttgaacaagctttcgctcaagcgcgaaaccgct
accgaacagcccaagctcgaagagcgcctgcacaaggtgctggcccaggccggcctcggc
tcgcgccgcgcgctggaacagcgcatcgcggacggcctggtcaaggtcaacggcgaagtc
gcccagaccggccagtcgatcaagagcggcgacaaggttgaactggacggccgtggcttt
gttgccaccgcgctgaccgaaacctcgcgcgtgctggcctacaacaagcccgaaggcgaa
gtgaccacccgcgaagatcccgaaggccgcccgaccgtgttcgaagcgctgccggccctg
aagggcgcgcgctggatcgccatcggccgcctcgacatcaacaccaccggcctgctgctg
gccaccaccgacggtgaactggccaacgccatgatgcacccgtcgtacgaggtggaacgc
gagtacgtggtgcgcgtgcgcgccccggaaggccaggaaaaggtgcctgacaacatcgtc
gaccgccttgcccgtggcgtcgcgctggatgacggcccggccaagttcgacgagatcgaa
cgcattggcggcaccgattcgcacgactggttccgcgtcgtggtgaaggaaggccgcaac
cgcgaagtgcgccgcctgtgggaatcgcagggctgccaggtcagccgcctgaagcgcacc
cgctacggcaagatcagcctgccgcgcgaactgctgcgcggccagtcgcaggaactcacc
gccaagcaggtcgagcagctgcgcgccgaactgaagctggaagaaggcgcgccgtcggcg
ctgaccctgcagccggtgatcggccagcgccgcgctgccaagaccaccgtgcgcgtgtcg
cgcgagggtggccgtggcaatgcctacgtcaacggcaacaacgtggccgatgaaggccgc
gaactgcgccgcttcgacaacgtgcgcgaagaccgcggccgcggccgcggcggcaagggc
ggcggcttcaagggcggcctgaccgtcagcggcgaagccgcagccaagcagtcgcagcgt
ccgttcaagcagcgccaggacaagaacagccgcgcgctgccggaaggcaacccggccgcg
ttccgcagctggtacgtgcccgatggcgtcagcaccggccccagcaaccaccgcaatgcc
ggtccgggcgcagcccgtggccccggcgcacgcggtccgggtgcaggcggccagggccgt
ccgttcggcaagcccaagcccggtgccggtggcggccagggtcgtggcggtttcggtggt
gaaggccgcggtgaaggccgtggtccctacggcggcgaaggccgcagcgaaggtcgtggc
ggctacggcggccagggccgtccggccggtgccggcgcaggcaaccgtggtggccagggc
gcacagcgccacccgtacggtcacccgggcaatgccccgagcttcccgtccgaccacgcc
aaccccggtgccagcccgtacggtaacgcgcgcccgagcggcaaccgcaatgccggcccg
cgcggtcccggcggcccgggtggtaatcgcggcccgggtggccccggcggcaaccgtggt
ccgggcggtcgtccgggtggcggtggtcgtcccggtggcggcaaccgcggccccggtggc
ggcggtcaccgtggcggcccgcgcggcggctga
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