Streptomyces olivoreticuli: QZH56_03810
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Entry
QZH56_03810 CDS
T09517
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sov
Streptomyces olivoreticuli
Pathway
sov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QZH56_03810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sov03400
]
QZH56_03810
Enzymes [BR:
sov01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QZH56_03810
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QZH56_03810
DNA repair and recombination proteins [BR:
sov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QZH56_03810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
DUF2188
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
WKK24768
LinkDB
All DBs
Position
complement(907253..908116)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALAGFLAGHLAGRTVERVLPVAVSVLKTYDPPLSAVEGRRVTAVTRYGKFLD
LATDGGPHLAFHLARAGWLRWHDRLPDAPPRPGRGPLALRLRLTDGAGFDLTEAGTQKRL
AVHCVREVSDVPGIARLGPDPLAPDFTRDAFAALLRDERRQLKGVLRDQSVIAGIGNAYS
DEILHAARMSPFKLAASLTEDEITTLHEALGTTLREAVERARGHAAAELKAEKKSGLRVH
GRTGQPCPVCGDTIREVSYRDSSLQYCPTCQTAGKPLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggtcgaagccctcgccgggttcctcgccgggcacctcgccgga
cgcacggtcgagcgggtgctcccggtggccgtgtccgtcctcaagacgtacgacccgccg
ctgagcgcggtcgaggggcggcgggtgaccgccgtgacccggtacggcaaattcctggac
ctggccaccgacggcggcccgcacctcgccttccacctcgcccgcgcgggctggctgcgc
tggcacgaccggctccccgacgccccgccgcgccccggcaggggcccgctcgcgctgcgg
ctccggctcaccgacggcgccgggttcgacctcaccgaggcgggcacccagaagcggctc
gccgtccactgcgtccgagaggtgtccgacgtgcccggcatcgcccggctcggcccggac
ccgctcgcgccggacttcacccgtgacgccttcgcggcgctgctgcgcgacgagcggcgg
cagctcaagggcgtcctgcgggaccagagcgtgatcgcgggcatcggcaacgcatactcg
gacgagatcctgcacgccgcccggatgtcccccttcaagctcgccgcgagcctgaccgag
gacgagatcaccacgctccacgaggcactgggcacgacgctgcgcgaggccgtcgagcgg
gcgcgcggccacgcggcggcggagctcaaggcggagaagaagagcgggctgagggtgcac
ggccgcaccggtcagccgtgcccggtctgcggcgacaccatccgcgaggtctcgtatcgc
gactcctcgctccagtactgcccgacgtgccagacggccggcaaaccgctcgccgaccgc
cggttgtcccgcctgctgaaatag
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