KEGG   Streptomyces olivoreticuli: QZH56_03815
Entry
QZH56_03815       CDS       T09517                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
sov  Streptomyces olivoreticuli
Pathway
sov03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sov00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    QZH56_03815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sov03400]
    QZH56_03815
DNA repair and recombination proteins [BR:sov03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     QZH56_03815
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      QZH56_03815
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_29 AAA_21 AAA_16 nSTAND1 DnaJ_CXXCXGXG AAA_25 AAA_33 AAA_22 DUF4350 Viral_helicase1
Other DBs
NCBI-ProteinID: WKK24769
LinkDB
Position
complement(908140..910545)
AA seq 801 aa
MTTPEGGAHDPYVRVRGAREHNLRAVDVDIPRDALVVFTGVSGSGKSSLAFGTVYAEAQR
RYFESVAPYARRLIHQVGAPKVEEISGLPPAVALEQRRSAPTSRSSVGTVTTLSNSLRML
FSRAGTYPEGAARLDSDAFSPNTAAGACPECHGLGQVHRVTEESLVPDASLSIRDGAIAA
WPGAWQGKNLRDILGALGHDLDRPWRDLPRADRDWILFTDEQPVVTVHPVRDADRIQRPY
KGTYMSARRYVLHTVADSKSTALRARAERHLVSGPCPVCAGRRLRPEALAVTFAGRDISA
LAALPLADLARTLRPACEGDGAAATLATDLVARVEVLTELGLGYLGTDRPTPTLSAGELQ
RLRLATQLRSGLFGVVYVLDEPSAGLHPADSAALLTVLDRLKAAGNSLFVVEHHLDVVRR
ADWIVDVGPRAGEHGGRILYSGPVAGLADVPGSATRPYVFPDGAAPVARTPREPSGALRL
RGITRHNLRGLDVEFPLGVFTAVTGVSGSGKSTLVGQVLAETVTAHLAGDPVTGAEGLDA
VHRLVTVDQKPIGRTPRSNLATYTGLFDAVRKVFAATDDARARGYTVGRFSFNVTAGRCE
VCQGEGFVAVELLFLPGTYAPCAACRGARYNPETLEITYRGANIAEVLDLTVDAAAGFLA
DVPAAARSLRTLQDVGLGYLRLGQPATELSGGEAQRIKLATELQRTRRGHTLYVLDEPTT
GLHPADTELLLRQLHGLVDAGNSVVVVEHDMAVAASADHVIDLGPGGGDAGGRVVAAGTP
HAVARAADSVTAPYLKAALRL
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgacgacccccgaaggcggcgcgcacgacccctacgtccgggtccgaggcgcgcgcgag
cacaatctgcgggccgtcgacgtcgacatcccgcgcgacgccctcgtcgtcttcaccggc
gtctccggctcggggaagtcctcgctcgccttcgggaccgtctacgccgaggcccagcgc
cgctacttcgagtccgtggcaccgtacgcccgccggctcatccaccaggtgggcgcgccc
aaggtcgaggagatcagcgggctgccgcccgccgtggccctggaacagcgcaggtccgcg
cccacctcgcggtcctccgtcggcaccgtcaccacactctccaactccctgcgcatgctc
ttctcccgcgccggcacctaccccgagggcgccgcgcggctggactccgacgccttctcg
ccgaacacggccgccggggcctgcccggagtgccacggcctgggacaggtccaccgggtc
accgaggaatcgctggtgcccgacgcgtcgctgtcgatccgcgacggcgccatcgccgcc
tggccgggcgcctggcagggcaagaacctccgcgacatcctcggcgccctcggccacgac
ctcgaccggccctggcgcgacctgccgcgcgccgaccgcgactggatcctcttcaccgac
gaacagcccgtcgtcaccgtccaccccgtgcgcgacgccgaccgcatccaacgcccctac
aagggcacctacatgagcgccaggcgctacgtcctgcacaccgtcgccgactccaagagc
accgccctgcgcgcccgcgccgaacggcacctggtcagcgggccctgcccggtgtgcgcc
ggacggcgcctgcggcccgaggcactggccgtcaccttcgccggccgggacatctccgcg
ctcgccgccctgccgctcgccgacctcgcgcggaccctgcgccccgcgtgcgagggcgac
ggcgcggccgccaccctcgccaccgacctcgtcgcccgcgtcgaggtgctcaccgaactc
ggtctcggctacctcggcacggaccggcccacccccaccctctcggcgggcgaactccag
cggctgcggctcgccacccagctgcgctcgggcctcttcggcgtcgtctacgtcctggac
gaaccctcggccggactgcaccccgccgacagcgccgcgctgctcaccgtcctggaccgg
ctgaaggccgcgggcaactcgctgttcgtcgtcgaacaccacctggacgtcgtacgccgc
gccgactggatcgtcgacgtcgggccgcgcgccggcgaacacggcgggcggatcctctac
agcgggcccgtcgccggactcgcggacgtgccgggatccgcgacccgcccctacgtcttc
cccgacggggccgcgcccgtggcccgcacaccccgcgagccctccggcgcgctgcggctg
cgcggcatcacccggcacaacctccgcggcctcgacgtggaattccccctcggcgtcttc
accgccgtcaccggcgtctccggctcgggcaagtcgaccctggtcggacaggtgctcgcg
gagaccgtgaccgcccacctcgcgggcgacccggtcacgggcgccgagggcctggacgcc
gtccaccggctcgtcacggtcgaccagaagccgatcggccgcacgccgcgctccaacctc
gccacgtacacgggcctgttcgacgccgtgcgcaaggtcttcgcggccaccgacgacgcc
cgcgcccgcggctacaccgtgggccgcttctccttcaacgtcaccgccgggcggtgcgag
gtgtgccagggcgagggcttcgtcgccgtcgagctgctgttcctgcccggcacgtacgcg
ccctgcgccgcgtgccgcggtgcgcgctacaacccggagacactggagatcacctaccgc
ggcgcgaacatcgccgaggtcctcgacctgaccgtcgacgccgccgccggcttcctcgcc
gacgtgcccgccgcggcccgcagcctgcgcaccctccaggacgtcggcctcggctacctg
cggctgggccagcccgccacggagctctccggcggcgaggcacagcgcatcaagctcgcc
accgagctccagcgcacccggcggggccacaccctctacgtcctcgacgagcccaccacc
ggactgcacccggccgacaccgaactcctgctgcggcagctgcacggactggtcgacgcg
ggcaactccgtggtggtcgtggagcacgacatggcggtggcggccagcgcggaccacgtc
atcgacctcgggcccggcggcggggacgcgggcgggcgcgtggtcgccgcgggcaccccg
cacgcggtggcccgcgcggcggacagcgtgacggcgccgtatctcaaggcggcgctgcgg
ttgtaa

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