Streptomyces olivoreticuli: QZH56_05645
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Entry
QZH56_05645 CDS
T09517
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sov
Streptomyces olivoreticuli
Pathway
sov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QZH56_05645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sov03000
]
QZH56_05645
03400 DNA repair and recombination proteins [BR:
sov03400
]
QZH56_05645
Enzymes [BR:
sov01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
QZH56_05645
Transcription factors [BR:
sov03000
]
Prokaryotic type
Helix-turn-helix
AraC family
QZH56_05645
DNA repair and recombination proteins [BR:
sov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QZH56_05645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WKK25104
LinkDB
All DBs
Position
complement(1322363..1323838)
Genome browser
AA seq
491 aa
AA seq
DB search
MYTDFDRCVRAVRSKDARFDGWFYTAVLTTRIYCRPSCPAVPPKDRNMTFYPSAAAAQQA
GFRACKRCRPDASPGSPQWNERADLVARAMRLIGDGTVDREGVPGLAARLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARILIETSELSMADAAFAAGFSSIRAFNETVREVFALSPS
ELRARAAHGRNPTTPGVLTLRLPFRAPLCPDNLFGHLVATAVPGVEEWRDGAYRRTLRLP
YGHGTVALSPRPDHIDCRLALSDLRDLAGAISRCRGLLDLDADPEAVDELLGADEWLAPL
VAKAPGRRVPRTVDPEEFAVRAVLGQQVSTAAARTLAARLVTAHGERVDDPTGGGLTHLF
PSAEALSGLDPTALAMPGGRRTTVVTLVRALASGELSLGVGSDRSQAYARLAELPGMGPW
TTGIIGMRALGDPDAFVPTDLGVRRGAAACGLPATPGALTRHAAAWRPWRAYAVQHLWAA
HDHPINDMPED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccgacttcgaccgctgtgtcagggccgtccgctccaaggacgcccgcttcgac
gggtggttctacaccgccgtgctcaccacacgcatctactgccgtccgagctgcccggcc
gtgccgccgaaggaccggaacatgaccttctaccccagcgcggccgccgcccagcaggcc
gggttccgggcctgcaagcgctgccggcccgacgccagccccggctcgccgcagtggaac
gagcgcgccgacctcgtcgcccgggccatgcggctcatcggcgacggcacggtcgaccgc
gagggcgtccctggcctcgccgcccgcctcggctacagcacccgccagatcgagcgccaa
ctgctcgccgagctcggcgccgggccgctcgcgctggcccgcgcccagcgcgcccagacc
gcccgcatcctcatcgagaccagcgaactgtccatggccgacgccgcgttcgccgccggc
ttctcctccatccgcgccttcaacgagaccgtccgcgaggtcttcgcgctctcgcccagc
gaactccgcgcccgcgcggcgcacggccggaaccccaccacccccggcgtgctgacgctc
cggttgcccttccgggcgcccctgtgccccgacaacctcttcggccacctcgtggccacc
gccgtgccgggcgtggaggagtggcgcgacggcgcgtaccgccgcaccctgcgcctcccg
tacggccacgggaccgtcgccctcagtccgcgccccgaccacatcgactgccgcctcgcc
ctctccgacctgcgcgacctggccggagccatcagccgctgccgcggcctcctcgacctc
gacgcggacccggaggcggtggacgaactgctgggcgccgacgagtggttggcgcccctg
gtcgccaaggcccccgggcggcgggtgccgcgcaccgtggaccccgaggagttcgccgtg
cgggccgtgctcggccagcaggtgtcgaccgccgcggcccgtacgctcgccgcccgcctc
gtcaccgcgcacggcgagcgcgtcgacgacccgacgggcggcggcctgacgcacctgttc
ccctcggccgaggcactgtccgggctcgaccccacggcgctcgccatgcccgggggacgc
cgcaccaccgtcgtgacactcgtccgggccctcgcgtccggcgagctctccctcggcgtc
ggcagcgaccggtcgcaggcgtacgcacggctcgccgagctccccggcatgggcccgtgg
accaccgggatcatcgggatgcgggcgctcggcgaccccgacgccttcgtgccgacggac
ctcggcgtccgccgcggcgccgcggcctgcggcctccccgctacgcccggggcactgacc
cggcacgccgccgcgtggcggccgtggcgggcgtacgccgtccagcacctgtgggcggct
cacgaccaccccatcaacgacatgcccgaggactga
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