Streptomyces olivoreticuli: QZH56_08030
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Entry
QZH56_08030 CDS
T09517
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sov
Streptomyces olivoreticuli
Pathway
sov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QZH56_08030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sov03019
]
QZH56_08030
03016 Transfer RNA biogenesis [BR:
sov03016
]
QZH56_08030
Enzymes [BR:
sov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QZH56_08030
Messenger RNA biogenesis [BR:
sov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QZH56_08030
Transfer RNA biogenesis [BR:
sov03016
]
Prokaryotic type
tRNA degradation factors
QZH56_08030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
CdsD_C
Motif
Other DBs
NCBI-ProteinID:
WKK25534
LinkDB
All DBs
Position
complement(2030678..2032894)
Genome browser
AA seq
738 aa
AA seq
DB search
MENETHYAEAVIDNGTFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKKPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAVLTCRLIDRPLRPSFKKGLRNEIQI
VETVMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGATRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGADAPTEEVVAAGLEAAKPFIKVLC
RAQSELAAKAAKPEGEFPVFLDYQDDVLAALTKAVRDELAQALTIAGKQERETEIDRVKE
LAAAKLLPEFEGREKEISAAYRSLTKSLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETGRVGSP
KRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDQRGKLSL
IPVIEGEDGDDAKDESAK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaagccgtgatcgacaacggcaccttcggcacccgc
accatccgcttcgagacgggtcgcctggccaagcaggccgccggctccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttccaagaagcccaaggaccag
ctcgacttcttccccctgacggtggacgtcgaggagcggatgtatgcagccggcaagatc
cccggctccttcttccgccgtgagggccggccctccgaggacgcggtcctcacctgccgc
ctgatcgaccggccgctgcgcccctccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacggtcatggcgctcaaccccgaccacctctacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctcgcgggcctgcccttctccggtccgatcggcgccacccgc
gtcgctctgatcaagggccagtgggtggcgttcccgacccacaccgagctcgaggacgcc
gtcttcgacatggtcgtggccggtcgcgtcctcgaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctggtcaaggacggcgccgacgccccc
accgaggaggtcgtcgccgccggtctcgaggccgcgaagcccttcatcaaggtgctgtgc
cgcgcccagtccgagctcgccgccaaggccgccaagcccgagggcgagttcccggtcttc
ctggactaccaggacgacgtcctggccgccctgaccaaggccgtccgcgacgagctcgcc
caggcgctcaccatcgccggcaagcaggagcgcgagaccgagatcgaccgggtcaaggag
ctcgccgcggcgaagctgctgcccgagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagtccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgtggggtgacggacatccgtaccctcgccgccgaggtcgaggccatcccgcgc
gtgcacggctcggcgctgttcgagcgcggcgagacccagatcctgggtgtcaccacgctg
aacatgctccgcatggagcagcagctcgacaccctctcgccggtgacgcgcaagcgctac
atgcacaactacaacttcccgccgtactccgtcggcgagaccggccgcgtcggttcgccg
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgcgatcgtgccggtcctcccg
acgcgcgaggagttcccctacgcgatccgtcaggtgtccgaggccctcggctccaacggt
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggtctgatctcccaggagatcgacggcaag
acgcactacgtcgccctcaccgacatcctcggtgcggaggacgcgttcggcgacatggac
ttcaaggtcgccggtacgaaggagttcgtcaccgcgctccagctcgacaccaagctggac
ggcatcccggcctccgtgctggccgcggccctcaagcaggcccgcgacgcccgtctgcac
atcctcgacgtgatgatggaagccatcgacacgccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggtacggtcgtcaag
accaccaccttcggtgccttcgtctccctcatgccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcggc
gtcggtgccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctcgctg
atcccggtcatcgagggcgaggacggcgacgacgctaaggacgagtccgcgaagtga
DBGET
integrated database retrieval system
