Streptomyces olivoreticuli: QZH56_13195
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Entry
QZH56_13195 CDS
T09517
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sov
Streptomyces olivoreticuli
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sov03016
]
QZH56_13195 (thpR)
Enzymes [BR:
sov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
QZH56_13195 (thpR)
Transfer RNA biogenesis [BR:
sov03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
QZH56_13195 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WKK26453
LinkDB
All DBs
Position
complement(3142939..3143502)
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AA seq
187 aa
AA seq
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MRLFAAVNPPSEIVAELAAAVAPLHSLPGAEHLRWTEPRTWHFTLAFLGEVDEALLPELT
ERLARAAHRHPPHELRFAGGGRFGDRILWVGADGERTVLRDLARSTAAGARRAGVAVDST
HDFRAHLTLARATGPVHLRPYAEGLADFAGTPWTVARLELVRSVLPASGIRGERPRYETV
AGWGLGH
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttttcgccgccgtgaaccccccgtcggagatcgtcgcggaactcgcggccgcc
gtcgccccgctgcactcgctgcccggcgcggaacacctgcggtggaccgagccccgcacc
tggcacttcaccctcgccttcctcggcgaggtcgacgaggcgctgctccccgaactcacc
gagcggctcgcgcgcgccgcgcaccggcacccgccgcacgagctgaggttcgccggcggc
gggcggttcggcgaccggatcctgtgggtcggcgccgacggcgaacgcaccgtcctgcgc
gacctcgcccgctccaccgccgcgggcgcccgccgcgccggggtcgcggtggacagcacg
cacgacttccgtgcccacctcaccctcgcccgcgccaccggcccggtgcacctgcggccg
tacgcggagggcctcgcggacttcgccggtacgccctggactgtcgcccgcctcgaactc
gtccgcagcgtcctccccgcgtccggcatccgcggcgagcgaccgcgctacgagacggtg
gcggggtgggggctggggcactga
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