Streptomyces olivoreticuli: QZH56_13300
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Entry
QZH56_13300 CDS
T09517
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sov
Streptomyces olivoreticuli
Pathway
sov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
QZH56_13300
09124 Replication and repair
03420 Nucleotide excision repair
QZH56_13300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sov03021
]
QZH56_13300
03400 DNA repair and recombination proteins [BR:
sov03400
]
QZH56_13300
Enzymes [BR:
sov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QZH56_13300
Transcription machinery [BR:
sov03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
QZH56_13300
DNA repair and recombination proteins [BR:
sov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
QZH56_13300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
IMD
Motif
Other DBs
NCBI-ProteinID:
WKK26473
LinkDB
All DBs
Position
3167595..3169244
Genome browser
AA seq
549 aa
AA seq
DB search
MNGPLIVQSDKTLLLEVDHDQADACRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVAFSRYPVPHALLVDIAETMARYGRLRLVKHPTHGLVLECTDRPVLEEILR
SKKIQPLVGARIDPDTVAVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHPIELNEDGWA
LRPYQKQAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQAKATTLILVTNTVSARQWKHEL
VKRTSLTEEEIGEYSGTRKEIRPVTIATYQVLTTKRKGIYPHLELFDSRDWGLVVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAESEEKYRYCATTATKRKVTEALVAKHQGEQTLVIGQYIDQ
LDELGEHLGAPVIKGETTNAQREKLFDAFRQGELSVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKADGHEARFYSVVARDTVDQDFAAHRQRFLAEQGYAYRIMDA
DSLLAGEDA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
ttgaacggacccctgatcgtccagagcgacaagacgttgctgctggaagtggaccacgac
caggcggacgcgtgccgccgcgcgatcgccccgttcgcggagctggagcgcgcgccggag
cacattcacacctatcgggtcaccccgctcggcctgtggaacgcccgggcggccgggcac
gacgcggagcaggtcgtcgacgccctggtcgccttctcccgctaccccgtgccgcacgcc
ctgctcgtcgacatcgccgagacgatggcccgctacgggcggctcaggctcgtgaagcac
cccacgcacggcctggtcctggagtgcacggaccggccggtgctcgaggagatcctgcgg
tcgaagaagatccagccgctggtcggcgcccggatcgacccggacacggtggcggtgcac
ccctccgagcgcggccagatcaagcagacgctgctgaagctcggctggcccgccgaggac
ctcgcgggctacgtcgacggcgaggcgcaccccatcgaactgaacgaggacggctgggcc
ctgcgcccgtaccagaagcaggccgtcgagggcttctggcacggcggctccggcgtcgtc
gtgctgccctgcggcgcgggcaagacgctcgtcggcgcgggcgcgatggcccaggcgaag
gccacgacgctgatcctggtgaccaacaccgtctccgcgcggcagtggaagcacgagctg
gtcaagcggacgtcgctgaccgaggaggagatcggcgagtacagcggtacgcggaaggag
atccgcccggtcaccatcgccacgtaccaggtcctgacgacgaagcggaagggcatctac
ccgcacctggagctcttcgactcccgcgactggggcctggtcgtctacgacgaggtgcac
ctgctgcccgcgccggtcttcaagttcaccgccgacctccaggcgcgccgccgcctcggg
ctgaccgccacgctcgtgcgcgaggacggccgcgagtcggacgtcttctccctcatcggc
ccgaagcgcttcgacgccccgtggaaggagatcgaggcgcagggctatatcgcgcccgcc
gactgcgtcgaggtccgcgtcaatctgacggacagcgagcggctggcgtacgcgacggcc
gagtcggaggagaagtaccgctactgcgcgaccaccgccaccaagcggaaggtcaccgag
gcgctggtcgccaagcatcagggcgaacagacgctggtcatcggccagtacatcgaccag
ctcgacgagctgggcgagcacctgggcgcgcccgtcatcaagggcgagacgaccaacgcc
cagcgcgagaagctcttcgacgcgttccgccagggtgagctgagcgtcctggtggtgtcg
aaggtcgccaacttctccatcgacctgcccgaggcgacggtcgccatccaggtctccggc
acgttcggctcccgccaggaggaggcgcagcgcctcggccgcgtcctgcgcccgaaggcg
gacggtcatgaggcgcgcttctactcggtggtggcgcgcgacacggtcgaccaggacttc
gcggcacaccgccagcggttcctggcggagcaggggtacgcgtaccggatcatggacgcg
gactcgttgctggcgggcgaggacgcgtag
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integrated database retrieval system
