Streptomyces olivoreticuli: QZH56_16930
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Entry
QZH56_16930 CDS
T09517
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sov
Streptomyces olivoreticuli
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sov03021
]
QZH56_16930
Transcription machinery [BR:
sov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QZH56_16930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
GerE
NirdL-like_HTH
DUF134
HTH_3
DUF7343
MarR
DUF4423
Motif
Other DBs
NCBI-ProteinID:
WKK27128
LinkDB
All DBs
Position
3886736..3887704
Genome browser
AA seq
322 aa
AA seq
DB search
MTAFAGELTVKGGVTVSARTVPEAPLQRDQPPASAEAHKPAPEARPPAPEERAAPAPDDP
GDEPEEPRSRGADARALTQVLFKEFVTLQPGTSEHTRVRAALIEANLPLVRYAAARFRSR
NEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLH
ELWVQVNGASEDLTVLHGRTPTTAEIAERLRIPEDEVLACIEAGRSYHATSLEAAQEGDG
LPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQISAELGVSQ
MHVSRLLSRSFARLRSANRIDA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttttgccggagagttgaccgtgaagggtggcgtgaccgtgtcggcccgtacc
gtccccgaagcccccctccaacgcgaccagccccccgcctccgcggaggcccacaagccc
gcccccgaggcccgccccccggctccggaggagcgggcggcccccgcccccgacgacccc
ggggacgagcccgaggagcccaggagccggggcgcggacgccagggcgctgacccaggtc
ctcttcaaggagttcgtcaccctccagcccggcacgtccgagcacacgcgcgtacgggcc
gccctgatcgaggccaacctcccgctggtgcgctacgccgcggcccgcttccgcagccgc
aacgagcccatggaggacgtcgtccaggtcggcacgatcggcctgatcaacgccatcgac
cggttcgaccccgaccgcggggtgcagttcccgaccttcgcgatgccgaccgtcgtcggc
gagatcaagcgctacttccgcgacaacgtccgcaccgtgcacgtcccccgccggctgcac
gagctgtgggtgcaggtcaacggcgcgagcgaggacctgacggtgctgcacgggcggacg
cccaccaccgccgagatcgccgagcggctgcggatccccgaggacgaggtgctggcctgc
atcgaggccgggcgttcgtatcacgccacctcgctggaggcggcccaggagggcgacggc
ctgcccggcctgctggaccggctcggctacgaggacccggcgctggccggggtcgaacac
cgtgacctcgtgcgccacctgctcgtccaactgccggagcgcgaacagcgcatcctgctg
ctgcgctactacagcaatctgacgcagtcccagatcagcgccgaactgggcgtctcccag
atgcacgtgtcccggctgctctccaggagcttcgcccggctgcgttccgcaaatcgaatc
gacgcgtaa
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