Streptomyces olivoreticuli: QZH56_16935
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Entry
QZH56_16935 CDS
T09517
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sov
Streptomyces olivoreticuli
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sov03021
]
QZH56_16935
Transcription machinery [BR:
sov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QZH56_16935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
DUF7343
MarR
HTH_24
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WKK27129
LinkDB
All DBs
Position
3887890..3888723
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AA seq
277 aa
AA seq
DB search
MSVDLGSAKVLANDAPHAVLDDCEAIDTRTLSRSLFLRLATLDRDSAERTYVRDTLIELN
LPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFF
RDTSWSVRVPRRLQELRLALTKASDELAQKLDRSPTVPELALCLGVSEDDVVDGLAVGNA
YTASSLDSPSPEDDGGEGSLADRLGYEDSALEGVEYRESLKPLLAKLPPRERQIIMLRFF
ANMTQSQIGEEVGISQMHVSRLLTRTLSQLREGLIAD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtagacctgggcagcgcgaaggtgctcgccaacgacgcaccgcacgccgtgctc
gacgactgcgaagccatcgacacccgcaccctctcccgctcgttgttcctgcggctggcc
acgctcgaccgggacagtgcggagcgtacgtacgtccgcgacactctcatcgagctcaat
ctgccgctcgtgcgctacgcggcggcccgcttccgcagccgcaacgagccgatggaggac
atcgtccaggtcggcacgatcggcctgatcaaggcgatcgaccggttcgactgcgaacgg
ggggtggagttcccgaccttcgcgatgccgaccgtcgtcggcgagatcaagcggttcttc
cgggacaccagttggtccgtgcgcgtgccgcgccggctccaggagctgcgactggccctg
accaaggccagcgacgagctcgcccagaagctcgaccgctcgcccaccgtccccgaactg
gccctgtgcctcggtgtgtccgaggacgacgtggtcgacgggctggcggtcggcaacgcc
tatacggccagttcactggattcgccgtcccccgaggacgacggcggcgagggctcgctc
gccgaccggctgggctatgaggacagcgcgctggagggcgtcgagtaccgcgagtccctc
aagccgctgctggccaagctgccgccgcgggagcggcagatcatcatgctgcgcttcttc
gccaacatgacgcagtcgcagatcggcgaggaggtcggcatctcccagatgcacgtctcc
cggctgctgacccgcacgctgtcacagctgcgcgaggggctcatcgccgactga
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