Streptomyces olivoreticuli: QZH56_19525
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Entry
QZH56_19525 CDS
T09517
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sov
Streptomyces olivoreticuli
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sov03016
]
QZH56_19525
Enzymes [BR:
sov01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
QZH56_19525
Transfer RNA biogenesis [BR:
sov03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
QZH56_19525
Prokaryotic type
tRNA splicing ligases
QZH56_19525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WKK21068
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All DBs
Position
4437985..4439178
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AA seq
397 aa
AA seq
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MSYTEVPGVRVPIRMWADPATVEGVAMQQLRNVSTLPWIEGLAVMPDVHFGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVRTSLTANDLPADLSRLRSKIEAAIPVGRGMHDDPVDPG
RLHGVPTAGWADFWGRFDGVAEAVKFRQDRAVKQMGTLGGGNHFIEFCLDESGSVWLMLH
SGSRNIGKELAEHHIGQARKLPHNQDLIDRDLAVFVSDTPQMAAYRHDLFWAQEYAKHNR
ELMMALYQDVVRKEFVKAKPTFEPVISCHHNYVAEETYDGKELLVTRKGAIRAGDGDYGI
IPGSMGTGSYIVRGLGNAASFNSASHGAGRKMSRNAAKKRFSTQDLEEQTRGVECRKDSG
VVDEIPGAYKPIEKVIEQQKDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacaccgaggtacccggcgtccgtgtaccgatccgcatgtgggccgacccggcc
acggtcgagggcgttgccatgcagcaactccgcaacgtctccaccctgccctggatcgag
ggcctcgcggtgatgccggacgtccacttcggcaagggcgccacggtcggctcggtgatc
gcgatgcggggggcggtgtgcccggcggcggtcggcgtggacatcggctgcggcatgtcg
gcggtccgtacgtccctgacggcgaacgacctcccggcggacctgtcccggctgcgctcg
aagatcgaggcggcgatcccggtgggccgggggatgcacgacgacccggtggacccgggc
cggctgcacggcgtgccgacggcggggtgggcggacttctgggggcggttcgacggagtg
gccgaagcggtcaagttccgtcaggatcgcgcggtgaagcagatgggaacgctcggcggc
ggaaaccacttcatcgaattctgtctcgacgagtcgggttcggtctggctgatgctgcac
tccggctcccggaacatcggcaaggagctcgccgagcaccacatcggccaggcccggaag
ctgccgcacaaccaggacctgatcgaccgcgacctcgccgtcttcgtctccgacaccccg
cagatggcggcctaccggcacgacctcttctgggcccaggagtacgcgaagcacaaccgc
gagctcatgatggcgctctaccaggacgtggtccgcaaggagttcgtgaaggcgaagccg
accttcgagcccgtgatctcctgccaccacaactatgtggccgaggagacctacgacggc
aaggagctgctggtcacccgaaagggagcgatccgcgcgggcgacggcgactacggcatc
atcccgggctcgatgggcaccggttcgtacatcgtgcgcggcctcggcaacgcggcgtcc
ttcaactccgcctcccacggcgcgggccgcaagatgagccgcaacgccgcgaagaagcgc
ttctccacccaggatctggaggagcagacgcggggcgtggagtgccgcaaggactccggc
gtcgtggacgagatcccgggcgcctacaaaccgatcgagaaggtcatcgagcagcagaag
gacctggtcgaggtcgtcgcgaagctcaagcaggtcgtctgcgtcaagggctga
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