Streptomyces olivoreticuli: QZH56_20940
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Entry
QZH56_20940 CDS
T09517
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sov
Streptomyces olivoreticuli
Pathway
sov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QZH56_20940 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sov03019
]
QZH56_20940 (recQ)
03400 DNA repair and recombination proteins [BR:
sov03400
]
QZH56_20940 (recQ)
Enzymes [BR:
sov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QZH56_20940 (recQ)
Messenger RNA biogenesis [BR:
sov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QZH56_20940 (recQ)
DNA repair and recombination proteins [BR:
sov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QZH56_20940 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
WKK21330
LinkDB
All DBs
Position
complement(4731708..4733576)
Genome browser
AA seq
622 aa
AA seq
DB search
MADPTQTSRPSDTSEALGCLQRVFGYDAFRGDQEEIIEHVVAGGDALVLMPTGGGKSLCY
QIPALVRPGVGVVISPLIALMQDQVDALRALGVRAGFLNSTQDLDERRMVEAEFLAGEID
LLYLAPERLRVEATLRLLDRGKISLFAIDEAHCVAQWGHDFRPDYLALSQLHERWPDVPR
IALTATATEATHTEIAGRLKLQDARHFVASFDRPNIQYRIAPKDEPKRQLLELLRSEHDG
DAGVVYCLSRKGVEDTAAFLAQNGIDALPYHAGLDARTRAANQSRFLREDGVVVVATIAF
GMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDGSE
GDDAHRRRLGAHLDAMLALCETVECRRVQLLAYFGQQSTACGNCDTCLTPAETWDGTIAA
QKFLSAVLRLARERRQKFGAGQIIDILLGKKTAKVIQHDHDGLTVFGIGTELSVAEWRGV
VRQLLAQGLLAVEGDYGTLVLTDASAEVLGRQREVRLRREPARAAKSASRSSSGAGKKSV
PVDLPAELVPVFESLRAWRGATAKELGVPAYVIFHDATLRQIATVSPSSLEELSGISGVG
EGKLAKYGPPILDLLAGLRAEG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccacccagacctcccgcccctccgacaccagcgaagcgctcggctgtctt
cagcgcgtcttcggctatgacgcgttccggggcgatcaggaagagatcatcgagcacgtc
gtcgcaggtggggacgccctcgtgctgatgcccaccggtggcggcaagtcgctctgctat
cagatcccggcgctcgtgcggcccggtgtgggcgtcgtgatctcgccgctgatcgcgctc
atgcaggaccaggtcgacgcgctgcgcgcgctcggtgtccgggcgggcttcctgaactcc
acgcaggatctcgacgagcggcggatggtcgaggcggagttcctcgcgggcgagatcgac
ctgctctatctggcgccggagcggctgcgggtcgaggcgacgctgcggctgctggaccgg
ggcaagatctccctgttcgccatcgacgaggcgcactgcgtggcgcagtggggccacgat
ttccggccggactacctggcgctttcccagctccacgagcgctggccggacgtgccgcgc
atcgcgctgaccgcgaccgccacggaggccacgcacacggagatcgcggggcggctgaag
ctccaggacgcccggcacttcgtggcgagcttcgaccggccgaacatccagtaccgcatc
gccccgaaggacgagcccaagcgccagctgctggagctgctgcgcagcgagcacgacggt
gacgcgggcgtggtctactgcctgtcccgcaagggcgtggaggacacggccgcgttcctc
gcgcagaacggcatcgacgccctgccgtaccacgcggggctcgacgcgcggacccgcgcc
gcgaaccagtcgcgcttcctgcgcgaggacggcgtggtcgtggtggccacgatcgcgttc
ggcatgggcatcgacaagccggacgtccggttcgtcgcccacctcgacctgccgaagtcc
gtcgagggttactaccaggagaccggccgagccgggcgcgacgggctgccgtccacggcc
tggctggcgtacgggctccaagacgtcgtccagcagcgcaagatgatcgacggttccgag
ggcgacgacgcccaccgccgcaggctcggcgcgcacctcgacgcgatgctggcgctgtgc
gagacggtcgagtgccgccgggtgcagctgctggcgtatttcggccagcagagcaccgcc
tgcggcaactgcgacacgtgtctgacgcccgccgagacgtgggacggcaccatcgccgcc
cagaagttcctctccgcggtgctgcggctggccagggagcggcggcagaagttcggcgcg
ggccagatcatcgacatcctgctgggcaagaagaccgcgaaggtcatccagcacgaccac
gacggcctgacggtcttcggcatcggcaccgagctgagcgtcgccgaatggcggggcgtg
gtccggcagttgctggcgcagggcctgctggccgtcgagggcgactacggcacactggtc
ctcaccgacgcgagcgcggaggtgctgggccggcagcgcgaggtgcggctgcggcgcgag
ccggcccgcgccgcgaagagcgcgtcccggtcctcgtcgggcgcgggcaagaagagcgtg
cctgtcgatctgccggcggagctggtgccggtcttcgagtccctgcgggcgtggcggggt
gccacggccaaggagctcggggtgcccgcgtatgtgatcttccacgacgcgacgctgcgg
cagatcgcgacggtgtcgccttcctccctggaggagctgtcgggcatcagcggggtgggc
gagggcaagctcgcgaagtacgggccgccgatcctggacctgctggcaggcctgcgagcg
gaggggtaa
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