KEGG   Streptomyces olivoreticuli: QZH56_22060
Entry
QZH56_22060       CDS       T09517                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
sov  Streptomyces olivoreticuli
Brite
KEGG Orthology (KO) [BR:sov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sov03021]
    QZH56_22060
Transcription machinery [BR:sov03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     QZH56_22060
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_24 HTH_Crp_2 MarR_2 Sigma70_ECF NirdL-like_HTH DUF7343 MarR HTH_3 IF2_N DUF1492
Other DBs
NCBI-ProteinID: WKK27566
LinkDB
Position
complement(4996950..4997855)
AA seq 301 aa
MEDTMSPRLDASRTGTLRETASSTTPPEQIEPENSGLPVIPPYDEVGPDDARALSKTLFA
RLAELEEGTHEYSYVRNTLVELNLALVKFAASRFRTRSEPMEDIVQVGTIGLIKAIDRFE
LSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLELARTRDEMAQQLDRAPTV
GELAERLGIAEEDVIEGMAASNAYTASSLDAQPAEDDDAEGALSARIGYEDHGLEGIEYV
ESLKPLIAELRPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRTLVRLRRGLMIE
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atggaggacaccatgtcaccccggctcgacgcatcgcgcaccggaacccttcgggagacc
gcgtcgtcgacaaccccgcccgaacagatcgagcccgagaattccgggctccccgtgatc
ccgccgtacgacgaggtggggccggacgacgcgcgggccctgtccaagacccttttcgcc
cgcctcgcggagctggaagagggcacccacgaatactcctacgtccgcaacacgctggtc
gaactcaacctggccctggtgaagttcgccgcctcgcggttccgcacccgcagcgagccg
atggaggacatcgtccaggtcggcacgatcggcctgatcaaggcgatcgaccgcttcgag
ctcagcaggggcgtcgagttccccaccttcgcgatgccgacgatcatcggcgagatcaag
cggttcttccgcgacacgagctggtccgtgcgcgtacccaggcggctccaggagctccgc
ctcgaactcgccaggacccgcgacgagatggcgcagcagctcgaccgcgcccccacggtc
ggtgagctcgccgagcggctcggcatcgccgaggaagacgtcatcgagggcatggccgcg
agcaacgcgtacaccgcgagctcgctcgacgcccagcccgccgaggacgacgacgccgag
ggcgcgctctcggcccgtatcggctacgaggaccacggcctcgaaggcatcgagtacgtg
gagtccctcaagccgctgatcgccgaactccggccccgggaccggaagatcctctccctg
cgcttcgtcgcgaacatgacgcagtcggagataggcgaggagctgggcatctcccagatg
cacgtctcgcggctgctgtcgcgcacgctggtgcggctgcgtcgggggctgatgatcgag
gaatga

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