Streptomyces olivoreticuli: QZH56_23565
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Entry
QZH56_23565 CDS
T09517
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sov
Streptomyces olivoreticuli
Pathway
sov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QZH56_23565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sov03400
]
QZH56_23565
Enzymes [BR:
sov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
QZH56_23565
DNA repair and recombination proteins [BR:
sov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QZH56_23565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
NPHP3_N
Helicase_RecD
PIF1
TraI_hel_assoc_N
PhoH
UvrD-helicase
AAA_16
DEAD
nSTAND3
AAA
HTH_IclR
UvrD_C
SLFN-g3_helicase
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
WKK21795
LinkDB
All DBs
Position
5319741..5321948
Genome browser
AA seq
735 aa
AA seq
DB search
MVNMAVVEGVLERITYANEESGYTVARVDTGRGSGDLLTVVGSLLGAQPGESLRMEGRWG
SHPQYGRQFTVENYTTLLPATIQGIRRYLGSGLIKGIGPRIADRITEHFGTDTLDVIEKD
PKRLIEVPGLGPKRTKMIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISVT
RHQPYRLAADVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSTDQGHCYLPEEKL
IADAVKLLQVDTGLVIDCLAELAGDEEGVVRESVPGPDGEPVTAVYLIPFHRAELSLAAQ
LTRLLRTEDDRLAAFRTVEWDKALAWLADRTGAELAPEQQQAVRLALSSKVAVLTGGPGC
GKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYDK
DRPLDADLVVVDEASMLDLLLANKLVKAVAPGAHLLLVGDVDQLPSVGAGEVLRDLLAPG
SPVPAVRLTRIFRQAQQSGVVTNAHRINSGVQPITQGLADFFLFPEEDTEEAGRLTVEVA
ARRIPAKFGLDPRRDIQVLAPMHRGPAGAGNLNALLQQAITPARPGLAERRFGGRVFRVG
DKVTQIRNNYEKGENGVFNGTVGVVTALDEVEQRLTVRTDEDEEVGYDFDELDELAHAYA
VTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRRALGQAVRTVSA
GRRCTALDHRLGRGA
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacatggcagtggtcgaaggggtcctggagcggatcacctacgccaatgaggag
agcggctatacggtcgcccgcgtcgacaccggccgcggcagcggcgatctcctcacggtc
gtcggctccctgctcggcgcgcagccgggggagtcgctgcggatggagggccgctggggc
tcccacccgcagtacggccgccagttcaccgtcgagaactacaccacgctgcttcccgcc
acgatccagggcatccgccgctatctgggctccggcctcatcaagggcatcggcccgcgc
atcgcggaccgcatcaccgagcacttcggcaccgacaccctggacgtcatcgagaaggac
cccaagaggctgatcgaggtgcccggcctcggccccaagcggacgaagatgatcggcgcc
gcctgggaggagcagaaggccatcaaggaggtcatggtcttcctccagggcgtcggcgtc
tccacctccatcgccgtgcggatctacaagaaatacggcgacgcctccatctccgtgacc
cgccatcagccctaccggctggccgccgacgtctggggcatcggcttcctgaccgccgac
cgcatcgcccaggccgtcggcatcccgcacgacagccccgagcgcgtcaaggccggtctg
cagtacgccctttcgcagtccaccgaccaggggcactgctacctccccgaggagaagctg
atcgccgacgccgtcaagctcctccaggtcgacaccgggctcgtcatcgactgcctcgcc
gagctcgccggcgacgaggagggcgtggtccgcgagagcgtccccggccccgacggcgag
cccgtcaccgccgtctacctcatccccttccaccgcgccgagctctccctcgccgcccaa
ctgacgcggctgctgcggaccgaggacgaccggctggccgccttccggaccgtcgagtgg
gacaaggcgctggcctggctcgcggaccgcacgggcgcggagctggcccccgagcagcag
caggcggtccggctcgcgctctccagcaaggtcgcggtcctcaccggcgggccgggctgc
ggcaagtccttcaccgtccgctcggtggttgagctggcccgcgccaagaaggccaaggtc
gtgctcgccgcccccaccgggcgggccgccaagcggctctccgagctcaccggcgccgag
gcgtccaccgtgcaccgcctcctggagctcaagcccggcggcgacgccgcgtacgacaag
gaccgcccgctggacgccgatctggtggtggtcgacgaggcgtccatgctcgatctgctg
ctggccaacaagctcgtcaaggccgtggccccgggcgcccacctgctgctcgtcggcgac
gtcgaccagctgccgtccgtgggtgcgggggaggtgctccgtgacctcctcgcgcccggc
agccccgtccccgccgtgcggctcacccgcatcttccggcaggcgcagcagtccggcgtg
gtcaccaacgcccaccgcatcaactccggtgtgcagcccatcactcagggtctggccgac
ttcttcctcttccccgaggaggacaccgaggaggcgggccggctcaccgtggaggtggcg
gccaggcgcatccccgcgaagttcggcctcgacccccgccgcgacatccaggtgctggcc
cccatgcaccgcggcccggccggcgccgggaacctcaacgcgctgctccagcaggcgatc
acgcccgcccgccccggcctcgcggagcgccgcttcggcggccgggtcttccgcgtcggc
gacaaggtcacccagatccgcaacaactacgagaagggggagaacggcgtcttcaacggc
acggtgggcgtggtcaccgccctggacgaggtcgagcagcgcctcaccgtgcgcaccgac
gaggacgaggaggtcggctacgacttcgacgaactcgacgaactcgcccacgcctacgcg
gtgaccatccatcgctcgcagggcagcgagtatccggcggtggtgatcccggtcaccacc
ggcgcctggatgatgctccagcgcaatctcctctataccgccgtgacccgggcaaagcgc
ctcgtggtcctggtgggctcccgcagggccctcggccaggccgtgcgcaccgtttccgca
ggccgcagatgtacggccctggatcaccggctggggaggggcgcctga
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