Streptomyces olivoreticuli: QZH56_27105
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Entry
QZH56_27105 CDS
T09517
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sov
Streptomyces olivoreticuli
Pathway
sov03030
DNA replication
sov03430
Mismatch repair
sov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QZH56_27105 (dnaE)
03430 Mismatch repair
QZH56_27105 (dnaE)
03440 Homologous recombination
QZH56_27105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sov03032
]
QZH56_27105 (dnaE)
03400 DNA repair and recombination proteins [BR:
sov03400
]
QZH56_27105 (dnaE)
Enzymes [BR:
sov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QZH56_27105 (dnaE)
DNA replication proteins [BR:
sov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QZH56_27105 (dnaE)
DNA repair and recombination proteins [BR:
sov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QZH56_27105 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DNA_pol_IIIA_C
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
WKK22429
LinkDB
All DBs
Position
complement(6083876..6087418)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHQAKKA
GVTPIIGIEAYVAPESRRNKRRIQWGQPHQKRDDVSGSGGYTHKTIWASNKTGLHNLFRL
SSDAYAEGWLTKWPRMDKETIAQWSEGLIASTGCPSGEVQTRLRLGQFDEAVQAASDYKD
IFGEGKYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTLLVAEQVDTTGWFEKRD
LMPKFDVPEGHTETSWFREETMRGMARRYPGGIPEDRLKQVEYEMDIIISMGFPAYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIEHGLIFERFLNPERISMPDVDI
DFDERRRAEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIPLSGILDPAHPRYGEAGEIRGMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSETITDHVPVWVRASDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGVELDLLKIPLDDPTTYELLCRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHPELEEPLKEVLGVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVFFKEGAQKKGFSEQAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMSALLTSVRDDKDKSAIYLNECRRMGIKVLPPNVNES
EANFAAQGDDVILFGLTAVRNVGQNVVDSIIRSRKSKGKYSSFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMGHTRKGLTAHYEPMIDNVVAVKRKEAEGQFDLFGGMGDETADDGPGFG
LDVEFSDIEWEKAYLLAQEREMLGLYVSDHPLFGIEHVLNDKADAAISQLTGGEHADGAI
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIDCMFFPATYQLVSTQLVEDAVVFVKGR
LDKREDIPRLVAMELMVPDLSNAGTNAPVIITIPTVKVTPPMVEKLGQVLTHHRGSTEVR
IKLQGPRKTTVLRLDRHRVTPDPALFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcacctgcacgtacacacgcagtactccctgctggacggt
gccgcgcggctcaaggacatgttcaacgcgtgcaacgagatgggcatgacccatatcgcg
atgtccgaccacggcaacctccacggcgcgtacgacttcttccatcaggccaagaaggcg
ggcgtcacgccgatcatcggcatcgaggcgtatgtcgcgcccgagtcccggcgcaacaag
cggcgcatccagtggggccagccgcaccagaagcgcgacgatgtgtccggttcgggtggt
tatacgcataagacgatctgggcgtcgaacaagaccggtctgcacaacctcttccggctg
tcctccgacgcctatgccgagggctggctgaccaagtggccccgcatggacaaggagacg
atcgcccagtggtccgagggcctgatcgcctccaccggctgcccgtccggcgaggtgcag
acccggctgcggctcggccagttcgacgaggccgtgcaggccgcgagcgactacaaggac
atcttcggcgaggggaagtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcctgctggagatcggcaagaagctcggcatcccgccgctggtcacc
aatgactcgcactacacctatgcgcacgaggcgaccgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccggctattac
ctgaagtcgacggacgagatgtacgccatcgactcctccgacgcctggcaggagggctgc
gccaacaccctcctggtcgccgagcaggtcgacaccacgggctggttcgagaagcgcgac
ctgatgccgaagttcgacgtgcccgaggggcacaccgagaccagctggttccgcgaggag
accatgcgcggcatggcccgccgctaccccggcggcatcccggaggaccggctcaagcag
gtcgagtacgagatggacatcatcatctcgatgggcttcccggcctacttcctcgtggtc
gccgacttcatcatgtgggcgaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggttcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcgagcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctccatgcccgatgtcgacatc
gacttcgacgagcgcaggcgcgccgaggtgatccgctatgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaccatcaaggccaagaacgccatcaaggac
tcggcccgcgtgctgggctatccgtacgcgatgggcgaccgcctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcccgctctccggcatcctcgaccccgcccacccgcgc
tacggcgaggccggcgagatccgcgggatgtacgagaacgagccggatgtgaagaaggtc
atcgacaccgcccgcggcgtcgagggcctcgtccggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagacgatcaccgaccacgtcccggtctgggtccgggcctccgac
ggcgtcaccatcacgcagtgggactacccgagctgtgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaagggcgtcgagctggacctgctgaagatcccgctggacgacccgacgacgtacgaa
ctgctctgccgcggtgacacgctcggtgtcttccagttcgacggcgggcccatgcgctcg
ctgctgcgcctgatgaagcccgacaacttcgaggacatttccgccgtctcggccctgtac
cggccgggcccgatgggcatgaactcgcataccaactacgcgctgcgcaagaacggccag
caggagatcacgccgatccacccggagctggaggagcccctcaaggaggtcctcggcgtc
acctacggtctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactccctcggcgaggccgacatcctccgccgcgtgatgggcaagaagaagcccgacgag
ctggcgaagaacttcgtcttcttcaaggagggcgcgcagaagaagggcttctccgagcag
gcgatccaggccctgtgggacgtcctggtgcccttcgccggctacgccttcaacaaggcc
cactcctcggcgtacggcctggtcacctactggaccgcctacctcaaggccaactacccg
gccgagtacatgtcggcgctgctcacctccgtgcgcgacgacaaggacaagtcggcgatc
tatctcaacgagtgccggcgcatgggcatcaaggtgctcccgccgaacgtcaacgagtcc
gaggccaacttcgcggcccagggcgacgacgtgatcctcttcggcctcaccgccgtccgc
aacgtcgggcagaacgtggtggactcgatcatccgctcccgcaagtccaaggggaagtac
agctccttcccggacttcctcgacaaggtcgaggccgtcgtctgcaacaagcgcaccgtc
gaatcgctgatcaaggccggcgccttcgacgagatgggccacacccgcaagggcctcacc
gcgcactacgaaccgatgatcgacaacgtggtggcggtcaagcgcaaggaggcggagggc
cagttcgacctcttcggcgggatgggcgacgagaccgccgacgacgggcccggcttcggt
ctggacgtggagttctccgacatcgagtgggagaaggcctatctgctcgcgcaggagcgc
gagatgctcggcctctatgtctccgaccacccgctcttcggcatcgagcacgtcctcaac
gacaaggccgacgccgccatctcccagctgaccggcggcgagcacgcggacggcgcgatc
gtcaccatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcc
tgggccatcgccaccgtcgaggatctggccggctccatcgactgcatgttcttcccggcc
acctatcagctggtctccacccagctcgtcgaggacgccgtcgtcttcgtcaagggccgc
ctggacaagcgcgaggacatcccgcgcctggtcgccatggagctgatggtccccgacctc
tccaacgcgggcaccaacgcccccgtgatcatcaccatccccaccgtgaaggtcaccccg
cccatggtggagaagctgggccaggtgctcactcaccaccgtggctccaccgaggtgcgg
atcaagctccaggggccgcggaagaccaccgtgctgcgcctggaccggcaccgggtcacg
cccgacccggcgctcttcggcgacctcaaggtgctgctcggcccgtcctgcctggccggc
tga
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