Sporomusa ovata: SOV_03560
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Entry
SOV_03560 CDS
T10406
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
sova Sporomusa ovata
Brite
KEGG Orthology (KO) [BR:
sova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sova03110
]
SOV_03560 (clpC)
Chaperones and folding catalysts [BR:
sova03110
]
Heat shock proteins
HSP100
SOV_03560 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
TniB
AAA_18
Mg_chelatase
AAA_7
IstB_IS21
UVR
AAA_14
Torsin
AAA_28
RNA_helicase
bpMoxR
RuvB_N
AAA_23
TsaE
Cytidylate_kin
Zeta_toxin
AAA_24
AAA_25
NACHT
ResIII
NBD_SMAX1
DNA_pol3_delta2
TIP49
KTI12
Motif
Other DBs
NCBI-ProteinID:
WWV69121
LinkDB
All DBs
Position
375373..377832
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AA seq
819 aa
AA seq
DB search
MFNRFTDRARKVLILAQQEAAKYGHGYIGTEHLLLGLLREGEGVAAKALNSLGLEIAAVR
VHVENILGTGQQQTSDIGYTPRAKKVIELAMEEALRLGHNYVGTEHILLGLIREGEGIAA
QVLTGLGVDINLMRQRVIEMLGGYSMSGQAPQPKSTANGGQASSGSTGTPLLDEFGRDLN
KMSQAGKIDPVIGRAAEIERVIQILLRRTKNNPVLIGEPGVGKTAIAEGLAKRIVEGQMP
EILRNKRVVSLNMASMVAGTKYRGEFEERLKKVIDEIRDAGNVVLFIDELHTLIGAGAAE
GAIDAANILKPALARGELQVIGATTLNEYKKYIEKDSALERRFQPITVGEPSVEDAIDIL
KGIRDKYEAFHRAQITDEAIEAAVRLSHRYISDRFLPDKAIDLMDEAASRVRLQSFSIPP
DIKEVEKRFEQVRTEKEAAIASQEFERAASLRDMEQQIREELETKQKEAKQRGNERIVVA
ADDIAHVVATWTRIPVKKLAEEESERLLKLEEILHNRVVGQHQAVQAVAKAVRRARAGLK
DPKRPIGSFLFLGPTGVGKTELSRALAEALFGDETAMIRLDMSEYMEKHTVSRLVGAPPG
YVGYEEGGQLTDAIRRKPYAVILLDEIEKAHYDVFNMLLQVLEDGRLTDSQGRTVDFKNT
VIIMTSNVGSQHLKKDAAGLGFLSEERAKANEGEAAKSRVLDEIKRIFRPEFLNRIDEII
VFSSLTDEDLKQIVDIMLKEVASRLSVANLSLELTEAAKNELLKEGRDPAFGARPLRRAI
QKLIEDEVSELIIRQTIAAGDTVVVETDDSGKLNFAKKA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatagatttacagacagagctcgtaaggtattaatattggcacagcaggaagct
gctaaatatggtcatggctacatcggcactgagcatttattgctggggctgttgcgggaa
ggtgaaggagtggctgccaaggctttgaattcattgggtttggaaatagctgccgtccgg
gtacatgtggaaaatattcttggtacaggtcagcagcagaccagtgatattggctatacg
ccgcgagctaaaaaggttattgaattagcgatggaagaggcgttgcgtctaggccataat
tatgtggggacagagcatattcttcttgggctcatccgcgagggcgaaggtattgcagcg
caagttctgacaggactgggcgtagatattaatcttatgcggcagcgggtcattgaaatg
ttgggtgggtattcgatgtcaggccaggcaccacagccaaagtccacagccaatggcggt
caagcgtcatcaggtagtactggaacaccgcttttagatgaatttggtcgcgatctcaat
aagatgtctcaggcagggaaaattgatccggtgattggccgggctgcggagattgagagg
gtaattcaaattcttttacggcgcactaagaataatccggtgcttataggcgaacctgga
gttggtaaaacagccattgccgagggtttagccaaacgcattgttgagggacagatgccg
gaaattttgcgtaacaaacgggtggtatcgcttaatatggcatctatggttgctggcacc
aaatatcgcggtgaattcgaagaacgcttaaaaaaagtaatcgatgaaattcgggacgcc
ggtaatgtagtcttgtttattgatgaattgcataccctcattggcgctggggctgcggag
ggggccattgatgctgctaatattttaaaaccagcgctggcgaggggtgaactgcaggtc
attggagctaccacacttaatgagtataaaaagtatattgaaaaagattctgccttggaa
cggcgtttccagccgatcactgtgggtgagcctagtgttgaagatgccattgacatttta
aaaggcataagagataaatatgaggcttttcaccgggcacaaattaccgatgaagctatt
gaggcagcggtaaggctttcgcatcgctatatttctgatcgctttttgccagataaagcc
attgatcttatggatgaagcagcctcacgcgtacggctacaatcattttctattccgcct
gatatcaaggaggtggaaaaacggtttgagcaggtacggacagaaaaggaagcagctatt
gcatcgcaggagtttgaacgggcagctagcctgcgcgatatggaacagcaaattcgcgaa
gaactggaaaccaagcaaaaagaggctaaacagcgtggtaatgaacgcatcgttgtagcg
gctgatgatattgcccatgtagttgctacctggactcggattccagttaaaaaattagct
gaagaagaatcagaacgattactcaagttggaagaaattttgcataatcgggtagttggc
cagcatcaggcggtgcaggcggtagccaaagcggtacgccgcgcccgggctggtctcaaa
gatcctaaacggcctattggctctttcctgttcctggggccgacaggggttggtaaaaca
gaactgtctcgcgctttagcggaagcgctatttggtgatgaaacagccatgattcgcctg
gatatgtcggagtatatggaaaaacatacggtatcacgccttgttggtgcacctcccggc
tatgttggctatgaagagggtggtcagttaactgacgctattcgacgcaagccctatgcg
gttattcttctggatgagattgaaaaggctcattatgacgtgttcaatatgctgctgcaa
gtactggaagatggtcgtttgaccgatagccagggacggacagttgattttaaaaatacc
gttattatcatgacatcaaatgttggttcccagcatttaaagaaggatgctgctggtttg
ggctttttatcggaagaaagagctaaggctaacgaaggcgaggcagccaaatcacgggtg
cttgatgagattaagcggatatttagaccggaatttttaaatcgaattgatgaaattata
gttttcagtagtctgacagacgaagatttgaaacagatagtagatatcatgcttaaagaa
gtagccagtcgattgtcagtagcaaacttgagcttggagttaaccgaggcagccaaaaac
gagctattaaaagagggacgggaccctgcttttggcgcccggccgctacgccgtgctatt
caaaaactgattgaagatgaggtttcggagttgattatccgtcagaccatcgccgccggc
gatacagtagtagttgagactgatgacagtggtaaattaaattttgccaagaaagcttga
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