Sporomusa ovata: SOV_03940
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Entry
SOV_03940 CDS
T10406
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sova Sporomusa ovata
Pathway
sova03020
RNA polymerase
Brite
Enzymes [BR:
sova01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SOV_03940 (rpoC)
Transcription machinery [BR:
sova03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SOV_03940 (rpoC)
DNA repair and recombination proteins [BR:
sova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SOV_03940 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WWV69153
LinkDB
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Position
408698..412666
Genome browser
AA seq
1322 aa
AA seq
DB search
MLDVNNFDSMRIGLASPEQILKWSHGEVKKPETINYRTLKPEREGLFCEKIFGPTRDWEC
HCGKYKRIRYKGIICDRCGVEVTRSKVRRDRMGHIELAAPVSHIWYFKGIPSRMGLILDV
SPRSLEKVLYFASYIVLDPGDTPLMKKQLLNENEYREHRDKYGSAFKVGMGAEAVKKLLE
ELDLEKMSRELRQELKEVSGQRKIRAIRRLEVTEAFRKSGNNPAWMIMDVVPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKE
MALELFKPFVMKKLVNAGHAHNIKSAKRMVERVRPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPVLSEGRAIKIHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARMLMLSAHNIL
STKDGRPVATPTQDMVLGAYYLTIEKEPEDGKIRAFSSLNEGLLAYQHKVLGLHEKIKMR
LDGYGLVHTTLGRVIFNEVLPPELRHFSKEDDGWHLGKIMDKKQLGKLVADSYQTFGNAK
TAVVLDAVKRLGFSFACRAGITIAISDIKIPAAKKEILTTAEIKVDTIDKQYRRGLITDD
ERYKKTIDLWTKATDDVTTALMNSLDRFNPVYMMANSGARGNIQQIRQLAGMRGLMADPS
GRIIDLPIKANFREGLTVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIVRE
EDCDVVGLNLVRERARLAKSSAGAIDMLKDSLLGRVLAQDVLDPKTLDIILTHGTLLDED
ALRLIGENGVPEIMIEGQADEIEEDVGRAAAETIVLGAPEEKVRAALKEAMIREMLGKNT
TEAIKTRDGVELVPADTPFTEEHIEAVLASSVKEVKVRNNNVRGIEVEAITEGSGVIESL
KDRIVGRMAAEDIIDPATGETIVKISDLITEELAEKVVKVRDKVSIRSVLTCRSRYGVCI
NCYGRNLGTGHMVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVEELF
EARKPKRQAIITEVDGRAEIKEIKGMRRVTIYPADASLGEERVYPIPYGSRLIVSEGQMV
EAGDRLTEGAVNPHDILRVSGLKATQRYLVYEVQKVYKSQGVEINDKHIEVMVRQMLHKV
KVEEAGDTDLLPSEYIDLNTFEEENAKAIEAGGEPAIARPILLGITKASLATDSFLSAAS
FQETTRVLTEAAIKGKVDPLLGLKENVIIGKLVPAGTGMSRYRNIRLKKVVSDQVEEEFP
VE
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
ttgttagacgtaaataattttgattcaatgcgtattggtctggcatcaccggagcaaatt
cttaagtggtcgcacggtgaagttaaaaaaccagaaaccattaattaccgtacgctaaaa
cccgaacgagagggtttgttctgtgaaaagatttttgggccaacccgggattgggaatgt
cattgcggtaagtataagcggattcgttataaaggtattatttgtgatcgatgtggcgta
gaagtaacccgctccaaagtccggcgtgaccggatggggcatattgagctggctgcacca
gtctcccatatctggtattttaaaggtatacccagcaggatgggactcattttggacgtc
tcgccacgttcactggaaaaagtcttatattttgcttcctatattgtgcttgatccaggc
gatacgccgctgatgaaaaaacaacttttaaacgaaaatgagtaccgggaacaccgcgat
aaatatggcagtgcattcaaggttggcatgggtgcggaagctgtcaaaaagctgctggaa
gaacttgatttagaaaagatgagccgagaactccgtcaggaactaaaagaagtaagcgga
cagcgtaaaatccgggcgattagacgtttggaggttacagaagcctttcgaaaatcagga
aataacccagcctggatgattatggacgtagtacctgttattccgccggaattgcgcccc
atggttcaattggacggcggacggtttgccacttcagacttaaatgacctgtatcgccgg
gtaattaaccgcaataaccgcctaaagagactgttagatttaggtgcacctgatatcatc
gtgcgtaacgaaaaacgcatgttgcaagaagctgtggatgcgcttatcgacaatggacga
cgtgggcgtcctgtcaccgggcctggtaatcgtccgttaaaatctttgagtgatatgctt
aaaggtaagcaagggcggtttaggcagaaccttttgggcaaacgggtggattattctgga
cgctcggttatcgtagttggtccggaacttaagttgcaccaatgcggactgcctaaagaa
atggcgttggaactgtttaaaccttttgttatgaaaaagctggttaatgccggccatgct
cataatattaaaagtgctaaacggatggtggaaagggttcgtcctgaggtatgggatgta
ctggaagaggtcatcaaagaacatccagtactcctaaaccgtgcgccgaccctgcacaga
cttggtattcaggcattcgaaccggtattgtccgaagggcgggctattaaaattcatcct
ttggtatgtactgcctataatgcggactttgatggcgaccaaatggccgtgcacgtacca
ctttcagccgaggcccaagccgaggcacgcatgctgatgctgtcagcgcataatatctta
tccaccaaagatggcaggccggtagctacgcctactcaggatatggtactgggtgcttac
tatttaacgattgaaaaagaacctgaagatggtaaaatcagagcgttttcaagcttaaac
gaaggattactagcttatcagcataaggtgctggggttacacgaaaaaataaaaatgcgt
ttagacggttatggcttggtacataccaccttaggtcgagtgatttttaatgaggtattg
ccgccagagctcaggcatttttctaaagaggacgatggctggcatttaggtaagataatg
gataaaaagcagcttggtaaattagttgctgactcctaccaaacctttggtaatgccaaa
acagcagttgtattagatgctgtaaaacgtcttggtttctcgtttgcctgtcgcgccggt
ataaccatagcgatttcagatatcaagattccagctgccaagaaagaaattttgacgacg
gctgagataaaggttgacaccattgataaacagtatcgtcgcggcttgattactgatgat
gagcgctataaaaagacgattgatctttggaccaaggctactgatgatgttaccacagcg
ctcatgaacagcctggatcgctttaatccggtatatatgatggctaactccggtgcccgt
ggtaatattcagcagatacgtcagttggctggtatgcggggtcttatggccgatccttcc
ggacgaatcattgacttgccgattaaagctaatttccgtgaaggcttgaccgtgttagag
tactttatctctactcatggagcgcgtaaaggcttggcagatactgcacttaggacagct
gactccggctaccttacccgtcggcttgttgatgtcgcccaagacgttatcgttcgggaa
gaagattgcgatgttgtcggacttaacctagtgcgggaacgggctcgtttagctaagtca
agtgctggggcaattgatatgctgaaagatagcttgttaggcagagttttggctcaggat
gtattagatcccaaaacattagatatcattttgacccacggaacactacttgacgaagat
gccttacgcttaattggcgaaaatggtgttccggaaattatgattgaaggtcaggcagat
gaaatagaagaagatgtcggtcgggcagctgctgaaaccattgttcttggtgcaccggaa
gagaaagtacgcgctgctctcaaagaagctatgattcgcgagatgcttggcaaaaacaca
acagaggccattaaaaccagggatggtgtcgagcttgttcctgctgatacgccgtttacc
gaagagcatattgaagctgttttagctagctctgttaaagaagtaaaagtgcggaataat
aatgttagaggaattgaagttgaggctatcacagaaggctctggtgtaattgaatcactt
aaagatcgtatcgtcggcaggatggcggcggaagatattattgatccagccaccggtgag
actattgtcaagattagcgacctgattacggaagaattggctgagaaggttgttaaagta
cgtgataaggtttccatccgctcagtactcacttgccgttcccgttatggtgtatgtatt
aattgctatgggcgtaacctgggcacaggccacatggtcgatgtcggtgaggctgtcggt
attatcgctgctcagtctatcggtgaaccaggtactcagcttacaatgagaacgtttcat
accggcggtgttgccggtgacgatattacccagggcttgccgagggtagaagaattgttt
gaggcccgtaaacctaaacgtcaggctattattactgaagttgacggtagggcggaaata
aaggaaatcaaaggtatgcgccgagttaccatttatccggcagacgcgtccctgggtgaa
gaacgtgtatacccaataccctatggctcacgactaattgtcagtgaaggtcaaatggtt
gaggcaggtgatcgtctgactgagggtgccgttaatccgcatgatattttgcgggttagc
ggactaaaagccacgcaacggtatctggtgtacgaagttcaaaaagtatataaatcccaa
ggtgttgaaataaacgataaacacattgaagttatggttcgtcaaatgctccacaaagtc
aaagtggaagaggcaggcgacaccgaccttctgccaagtgagtatattgatttgaatacc
tttgaagaagaaaatgctaaggctattgaagctggcggagaacccgccattgccagaccc
attcttcttggtattacgaaagcctcgctggccactgattccttcttatctgcggcttcc
ttccaggagaccacacgcgtgctcaccgaagcggcgataaaaggtaaggttgatccacta
ttggggcttaaagagaatgttatcattggtaaacttgttcctgctggtacaggcatgagt
cgttaccgtaacattcgattaaaaaaagttgtttctgatcaggtggaggaagagttccca
gttgaataa
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