Sporomusa ovata: SOV_15420
Help
Entry
SOV_15420 CDS
T10406
Name
(GenBank) ATP-dependent helicase HepA
Organism
sova Sporomusa ovata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
SWIM
Flavi_DEAD
ERCC3_RAD25_C
SWI2_SNF2
YpjP
SNaCT8
Motif
Other DBs
NCBI-ProteinID:
WWV70249
LinkDB
All DBs
Position
complement(1580634..1583900)
Genome browser
AA seq
1088 aa
AA seq
DB search
MLADETIKYEADSDASYIRGCHYYHNNCVDNLHLTRQDNTFEARVRGHYFYIVTVTFNGQ
EKIKNYVCDCPAFHPRKGACKHVVAVLKAIQQAWSDYFGTFKSVPLTRSTQKMLDFFQNQ
ATAGTSEKPGTSQLVKLTPTYGFQVHNTRKISYLEFTIGSDRMYVLKDIVQLLVALDTNQ
EIVFGKNLTLNPQDVLFDDLSARLLKMLQQAYKEEKERVFWNLPNFSGSASHSAFSDSRH
FKLTNTNLLHFLTAMGSEPFTAIVNDQKITNLTINNGRPPVKLAITAINGGLSLTMNLTN
DVFYGLDADFQYIFHNKAIYHVDTVFAQYIKHLLNCFSENRKPELYIPAATVSEFVSATL
PALETIAAVTIDSAVHKKFHKKHLQKRVYLDKYAAGISAKIEFCYGDVVIQYNAGTTPAP
TAVNDKWLLRSAIEEKILVNIFQRHGFVWAADKFILAAEEDAYTFLQQVLPELQDSAEIF
YSDEFNNMKIQPPGKIAAGIRLNTATDMLEFSLDLEDISSKELIELLAAYKLKKRYHRLP
AGGFIPLDSPEFQTVAGLIEELGLRPGDIEKQVVELPKYRALYLDSLARETTDFSFERNS
AFKRMVQDIREPQDIEYAVPPGIQGKLRDYQKTGLKWLKSLAHYGLGGILADDMGLGKTL
QVLTFILAEKEHSLAPALVIAPTSLVYNWQEEVVKFVPSLKAVVISGQPAERLEQFKAID
NADLVITSYALIKRDIEFYKKRNFSYCFLDEAQHIKNPNTLNAKSVKQIKAKSYFALTGT
PIENTLTELWSIFDFLMPGYLRTHKVFTNRFEIPIVKNGDQKALQELGRHIKPFILRRMK
KAVLKELPKKIESKMVNEMTADQTNLYAAWLLKARQEFETEVSTKGFEKSHIKILSLLTR
LRQICCHPALFIENYQGGSGKLEMLQELLKDATDGGHRILLFSQFTGMLALIKQQLAAMK
INYYYLDGATKAEDRITLVNSFNAGEKEVFLISLKAGGTGLNLTGADIVIHYDPWWNPAV
EDQATDRAYRIGQKNSVQVYKLITKNTIEEKIYLLQQKKKEMIDSLIKPGENLLTKMNET
EIRELFTL
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgttagcagatgaaacaattaagtatgaagctgattctgacgcttcctatataaggggc
tgccattattatcacaacaactgtgtcgataacttacatttgacacgccaggataacacc
tttgaggcccgggttcgcggccactatttctatatcgtaaccgtgacctttaacggtcag
gagaaaatcaaaaattacgtctgtgattgcccggcatttcatcctcgcaaaggcgcctgt
aaacatgttgttgccgtattaaaagccattcaacaagcttggtcagactactttggtaca
tttaaatcagtaccgctaacacgctccactcagaaaatgctcgattttttccaaaaccag
gctaccgcaggaacttctgaaaaaccaggcacaagccaattagtaaagctaactccaacc
tatggtttccaggtacataatacgagaaaaataagttacttagaatttaccattggttct
gaccgcatgtatgtcctgaaggatattgtgcaactacttgtcgccttagataccaaccag
gaaattgtttttggcaaaaatttgactttgaatcctcaggacgtattgtttgatgatttg
tcagctaggttactaaaaatgctgcagcaggcttataaagaagaaaaggagcgcgtcttt
tggaatcttcccaacttttcaggctctgcgtcacattcagcctttagtgattcacggcac
tttaaacttactaatacaaatctgttacattttttaaccgctatgggctctgagccattt
acggcaatagttaacgatcaaaaaataacaaatctcactattaataatggcagaccacct
gtcaagttggctattacggccatcaatggcggcttaagcctaaccatgaatttgacaaat
gacgtattttacggacttgatgctgattttcaatacatctttcataataaagccatctat
catgtggatactgttttcgcacaatatattaaacacttactgaattgctttagtgaaaat
cgcaaacctgaattatacattcctgctgccactgtgtcagagtttgtatcagctacctta
ccggcattggaaacaattgccgctgttaccattgattcagctgtacataaaaaattccat
aaaaagcacttgcaaaaacgggtatatctcgataaatatgccgcaggcataagtgccaaa
attgaattttgctacggcgatgtggttatccagtataatgccggcaccactccggcacca
actgctgttaacgataaatggctgctgcggtcagccattgaagaaaaaatactagtaaac
atttttcagcggcatggttttgtctgggcagctgacaagttcattttagccgcagaagaa
gacgcctacacctttttgcagcaggttttgccggaactgcaagatagtgcagaaatcttt
tattcagatgaatttaacaatatgaaaatccagcctcccggaaaaattgccgccggtata
agactgaatacagctactgacatgctggagttttcccttgaccttgaagatatatcatca
aaagaactaattgagttattagctgcctataaattaaaaaagcggtatcaccgcctccct
gcaggcgggtttataccgcttgattcccctgaattccagacggttgccgggcttattgag
gaattaggtctccgtcccggggatattgaaaaacaagttgttgaactacccaaataccga
gccttatacttggatagcctggcaagagaaacaactgacttttcctttgaaagaaacagc
gcttttaagcgcatggtgcaagatatccgtgaaccacaagacattgaatatgctgttccc
ccgggaattcagggaaagctgcgagattatcagaaaacaggtttaaagtggcttaagtca
ctggcacattacggtttgggaggaattctggctgacgacatgggtctgggaaagaccctg
caagtactcactttcattcttgcagaaaaagaacattctcttgcaccagcacttgttatt
gcaccaacctcactggtatataactggcaggaagaagtagtaaaatttgtccctagtcta
aaagcagtcgttatctccggtcagcctgcagaacggttagaacagttcaaagctattgac
aatgccgatttagttataacctcctatgcccttatcaaacgcgatatcgaattctacaaa
aaaagaaacttctcgtactgttttcttgatgaagcacaacatatcaaaaaccccaacacc
ctaaatgccaaatcggtgaaacaaatcaaagccaaaagttattttgcgcttaccggtacc
cctattgaaaatacactgacagagttatggtcaattttcgattttttaatgccaggctat
ctgcgcacccacaaggtttttaccaaccggttcgaaattcccatagtcaaaaatggcgac
caaaaagctttgcaagagttaggccgtcatattaagcctttcattttgcggcgcatgaaa
aaagcagttctaaaagaactgccgaaaaaaatcgaaagcaaaatggttaacgaaatgact
gccgaccaaaccaatttatatgctgcctggctcctaaaagccaggcaggagtttgaaact
gaggtcagcaccaaaggctttgaaaaaagtcatattaaaatattatccttattaacccgc
ctgcgccaaatctgttgccaccctgccttgtttattgaaaattatcagggaggcagcggc
aaactggagatgctgcaggaattattgaaagacgctaccgatggtggtcacagaattctg
ctattctcccaatttaccggcatgttagccctaattaagcaacaacttgcggccatgaaa
attaactactactatttagatggcgcaactaaggctgaggatcgaattacactggttaat
tcttttaatgccggtgaaaaagaggttttcctcatatcgctgaaagcaggtggaaccggc
ctcaatcttactggcgccgacatagttattcactatgacccgtggtggaatcccgctgtc
gaagatcaggctaccgaccgggcttaccggattggacaaaaaaattccgtccaagtctat
aaactaattaccaaaaatacgattgaggaaaaaatatacctgctgcagcagaaaaagaag
gaaatgattgactccctcattaagcctggtgaaaacctcctgactaagatgaatgaaact
gaaatcagagagttatttactttataa
DBGET
integrated database retrieval system
